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Pompanopeptins A and B, new cyclic peptides from the marine cyanobacterium Lyngbya confervoides
Authors:Susan Matthew  Valerie J Paul
Institution:a Department of Medicinal Chemistry, University of Florida, 1600 SW Archer Road, Gainesville, FL 32610, United States
b Smithsonian Marine Station, 701 Seaway Drive, Fort Pierce, FL 34949, United States
Abstract:A new 3-amino-6-hydroxy-2-piperidone (Ahp) containing peptolide, pompanopeptin A (1), and a novel N-methyl-2-amino-6-(4′-hydroxyphenyl)hexanoic acid (N-Me-Ahpha) containing cyclic pentapeptide connected with a sixth amino acid residue via a rare ureido linkage, pompanopeptin B (2), were isolated from the marine cyanobacterium Lyngbya confervoides collected from the southeastern coast of Florida. Their planar structures were determined by a combination of NMR spectroscopic analysis and mass spectrometry. The absolute configurations were established using advanced Marfey's method and chiral HPLC analysis of the chemical degradation products. Compound 1 selectively inhibited trypsin over elastase and chymotrypsin, with an IC50 value of 2.4 μM; selectivity is conferred by an arginine residue in the cyclic core.
Keywords:Natural product  Cyanobacteria  Lyngbya confervoides  Trypsin inhibitor
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