Peptide Bond Formation in the Protonated Serine Dimer Following Vacuum UV Photon-Induced Excitation |
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Authors: | Ori Licht Darío Barreiro-Lage Patrick Rousseau Alexandre Giuliani Aleksandar R Milosavljevi? Avinoam Isaak Yitzhak Mastai Amnon Albeck Raj Singh Vy T T Nguyen Laurent Nahon Lara Martínez-Fernández Sergio Díaz-Tendero Yoni Toker |
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Institution: | 1. Physics Department and Institute for Nanotehcnology and Advanced Materials, Bar-Ilan University, Ramat-Gan, 5290002 Israel;2. Departamento de Química, Universidad Autónoma de Madrid, 28049 Madrid, Spain;3. Normandie Univ, ENSICAEN, UNICAEN, CEA, CNRS, CIMAP, 14000 Caen, France;4. Synchrotron SOLEIL L'Orme des Merisiers Départementale 128, 91190 Saint-Aubin, France;5. Chemistry Department and Institute for Nanotehcnology and Advanced Materials, Bar-Ilan University, Ramat-Gan, 5290002 Israel |
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Abstract: | Possible routes for intra-cluster bond formation (ICBF) in protonated serine dimers have been studied. We found no evidence of ICBF following low energy collision-induced dissociation (in correspondence with previous works), however, we do observe clear evidence for ICBF following photon absorption in the 4.6–14 eV range. Moreover, the comparison of photon-induced dissociation measurements of the protonated serine dimer to those of a protonated serine dipeptide provides evidence that ICBF, in this case, involves peptide bond formation (PBF). The experimental results are supported by ab initio molecular dynamics and exploration of several excited state potential energy surfaces, unraveling a pathway for PBF following photon absorption. The combination of experiments and theory provides insight into the PBF mechanisms in clusters of amino acids, and reveals the importance of electronic excited states reached upon UV/VUV light excitation. |
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Keywords: | Cluster Compounds Gas-Phase Reactions Mass Spectrometry Quantum Chemistry UV/Vis Spectroscopy |
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