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Oligonucleotides Containing Disaccharide Nucleosides
Authors:Ekaterina&#x;V Efimtseva  Georgii&#x;V Bobkov  Sergey&#x;N Mikhailov  Arthur Van&#x;Aerschot  Guy Schepers  Roger Busson  Jef Rozenski  Piet Herdewijn
Abstract:Disaccharide nucleosides with 2′‐O‐(D ‐arabinofuranosyl), 2′‐O‐(L ‐arabinofuranosyl), 2′‐O‐(D ‐ribopyranosyl), 2′‐O‐(D ‐erythrofuranosyl), and 2′‐O‐(5‐azido‐5‐deoxy‐D ‐ribofuranosyl) substituents were synthesized. These modified nucleosides were incorporated into oligonucleotides (see Table). Single substitution resulted in a ΔTm of +0.5 to −1.4° for DNA/RNA and a ΔTm of −0.8 to −4.7° for DNA/DNA duplexes. These disaccharide nucleosides can be well accommodated in RNA/DNA duplexes, and the presence of a NH2−C(5″) group has a beneficial effect on duplex stability.
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