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Hybrid-DFT Study and NBO Analysis of the Stereoelectronic Interaction Effects (Associated with the Anomeric Effects) on the Conformational Properties of 2,3,5,6-Tetrahalo-1,4-dioxanes and Their Analogs Containing S and Se Atoms
Authors:Davood Nori-Shargh  Arezoo Khamooshi-Sarabi  Sasan Sharifi  Elham Sheikh-Ansari
Institution:1. Chemistry Department, Science and Research Branch , Islamic Azad University, Hesarak , Poonak, Tehran, Iran;2. Chemistry Department, Medical Science Branch , Islamic Azad University , Tehran, Iran;3. Chemistry Department, Arak Branch , Islamic Azad University , Arak, Iran
Abstract:NBO analysis and hybrid density functional theory–based method (B3LYP/6-311+G**) was used to study the anomeric effects (AE), dipole–dipole interactions, and steric repulsion effects on the conformational properties of 2,3,5,6-tetrahalo-1,4-dioxane halo = F (1), Cl (2), Br (3)], 2,3,5,6-tetrahalo-1,4-dithiane halo = F (4), Cl (5), Br (6)], and 2,3,5,6-etrahalo-1,4-diselenane halo = F (7), Cl (8), Br (9)]. B3LYP/6-311+G** results revealed a strong axial preference in compounds 13. Gibbs free energy difference (G eqG ax) values (e.g., ΔG eq-ax) between the axial and equatorial conformations of compound 1 to compound 3 are 8.19, 3.86, and 3.13 kcal mol?1, respectively, as calculated by the B3LYP/6-311+G** level of theory. On the other hand, the NBO analysis of donor–acceptor (bond–antibond) interactions revealed that the AE for compounds 1–3 are ?12.26, ?16.46, and ?18.11 kcal mol?1, respectively. Contrary to the increase of the AE values from compound 1 to compound 3, the increase of the steric repulsions (e.g., 1,3-syn-axial repulsions) could fairly explain the decrease of the axial conformation stability in compounds 13 compared to their equatorial conformations. Further, the correlations between the AE, structural parameters, and conformational behavior of compounds 4–9 have been investigated.
Keywords:Ab initio  anomeric effects  molecular modeling  NBO  2  3  5  6-tetrahalo-[1  4]dioxane  2  3  5  6-tetrahalo-[1  4]diselenane  2  3  5  6-tetrahalo-[1  4]dithiane
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