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Monitoring of yeast fermentation by ion mobility spectrometry measurement and data visualisation with Self-Organizing Maps
Authors:Mikko Kolehmainen  Päivi Rönkkö
Institution:a Department of Environmental Sciences, University of Kuopio, P.O. Box 1627, FIN-70211 Kuopio, Finland
b Centre for Training and Development, University of Kuopio, P.O. Box 1627, FIN-70211 Kuopio, Finland
c Food and Health Research Centre, University of Kuopio, P.O. Box 1627, FIN-70211 Kuopio, Finland
Abstract:Ion mobility spectrometry (IMS) measurement combined with unsupervised neurocomputing is considered as a new potential method for on-line monitoring of fermentation and other processes producing volatile compounds that involve micro-organisms. This was demonstrated in a model system in which a strain of brewer’s yeast (Saccharomyces cerevisiae) was cultivated in a bench-top fermenter. Five phases of yeast growth could be detected from measurements of the exhaust gases from the fermenter, as indicated by the changes in ion mobility spectra analysed by computational methods.The data were first processed using the Self-Organizing Map (SOM) algorithm, the results showing that the phases of fermentation can be detected and identified. The cultivations were also shown by Sammon’s mapping to be comparable to a certain level of accuracy. Contaminated cultivation could be detected by its distinctive ion mobility spectrometry profile.
Keywords:Ion mobility spectrometry  Self-Organizing Maps  Sammon&rsquo  s mapping  Yeast fermentation  Growth phases  Visualization
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