Rapid Determination of Fast Protein Dynamics from NMR Chemical Exchange Saturation Transfer Data |
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Authors: | Yina Gu Dr Alexandar L Hansen Dr Yu Peng Prof?Dr Rafael Brüschweiler |
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Institution: | 1. Department of Chemistry and Biochemistry, The Ohio State University, Columbus, OH, USA;2. Campus Chemical Instrument Center, The Ohio State University, Columbus, OH, USA;3. Department of Biological Chemistry and Pharmacology, The Ohio State University, Columbus, OH, USA |
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Abstract: | Functional motions of 15N‐labeled proteins can be monitored by solution NMR spin relaxation experiments over a broad range of timescales. These experiments however typically take of the order of several days to a week per protein. Recently, NMR chemical exchange saturation transfer (CEST) experiments have emerged to probe slow millisecond motions complementing R1ρ and CPMG‐type experiments. CEST also simultaneously reports on site‐specific R1 and R2 parameters. It is shown here how CEST‐derived R1 and R2 relaxation parameters can be measured within a few hours at an accuracy comparable to traditional relaxation experiments. Using a “lean” version of the model‐free approach S2 order parameters can be determined that match those from the standard model‐free approach applied to 15N R1, R2, and {1H}‐15N NOE data. The new methodology, which is demonstrated for ubiquitin and arginine kinase (42 kDa), should serve as an effective screening tool of protein dynamics from picosecond‐to‐millisecond timescales. |
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Keywords: | CEST lean model-free analysis NMR spectroscopy protein dynamics spin relaxation |
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