Designability of Protein Structures on the Hexagonal Lattice Model |
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作者姓名: | 张卫 孙智波 邹宪武 |
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作者单位: | DepartmentofPhysics,WuhanUniversity,Wuhan430072 |
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摘 要: | In view of the bonding angle and the number of neighbouring sites, the hexagonal lattice model is preferred to investigate the designability of protein structures. Here we simulate the designable structures by the simplified HP model in a two-dimensional hexagonal lattice with an unrestricted boundary. The result shows that the structures with a large number of core sites correspond to the high designability and have circular-like profiles. The maximum and average designabilities for the hexagonal lattice model are much higher than those for thesquare lattice mode, and the maximum and average designabilities for the square lattice model are much higher than those for the triangle lattice model.
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关 键 词: | 蛋白质 六边形格子模型 二维空间 自由边界 |
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