Kinetic investigation of small systems using different algorithms |
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Authors: | F Taherkhani G A Parsafar M R Rahimitabar |
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Institution: | 1. Department of Chemistry and Nanotechnology Research Center, Sharif University of Technology, Tehran, Iran 2. Department of Physics, Sharif University of Technology, Tehran, Iran
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Abstract: | We have investigated different algorithms for the simulation of kinetics of small systems. We have simulated the first order reversible reaction with the Gillespie, Gibson and Bruck time simulation as a function of Poisson distribution and compared the results of three algorithms. We have also simulated intracellular viral kinetics for a genome with Gillespie and Poisson distribution algorithms. |
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