Transient diffusion in a tube with dead ends |
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Authors: | Dagdug Leonardo Berezhkovskii Alexander M Makhnovskii Yurii A Zitserman Vladimir Yu |
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Institution: | Departamento de Fisica, Universidad Autonoma Metropolitana-Iztapalapa, 09340 Mexico DF, Mexico. ldagdug@helix.nih.gov |
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Abstract: | A particle diffusing in a tube with dead ends, from time to time enters a dead end, spends some time in the dead end, and then comes back to the tube. As a result, the particle spends in the tube only a part of the entire observation time that leads to slowdown of its diffusion along the tube. We study the transient diffusion in a tube with periodic identical dead ends formed by cavities of volume V(cav) connected to the tube by cylindrical channels of length L and radius a, which is assumed to be much smaller than the tube radius R and the distance l between neighboring dead ends. Assuming that the particle initial position is uniformly distributed over the tube, we analyze the monotonic decrease of the particle diffusion coefficient D(t) from its initial value D(0)=D, which characterizes diffusion in the tube without dead ends, to its asymptotic long-time value D(infinity)=D(eff)
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