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Temperature Integration: An efficient procedure for calculation of free energy differences
Authors:Asaf Farhi  Guy Hed  Michael Bon  Nestor Caticha  Chi H Mak  Eytan Domany
Institution:1. Physics Department, Weizmann Institute of Science, Rehovot 76100, Israel;2. Center for Educational Technology, Tel Aviv 61394, Israel;3. Institut de Physique Théorique, CEA Saclay, CNRS, 91191 Gif-sur-Yvette, France;4. Institute of Physics, University of São Paulo, São Paulo, SP, Brazil;5. Department of Chemistry, University of Southern California, CA 90089-0482, USA
Abstract:We propose a method, Temperature Integration, which allows an efficient calculation of free energy differences between two systems of interest, with the same degrees of freedom, which may have rough energy landscapes. The method is based on calculating, for each single system, the difference between the values of lnZlnZ at two temperatures, using a Parallel Tempering procedure. If our two systems of interest have the same phase space volume, they have the same values of lnZlnZ at high-TT, and we can obtain the free energy difference between them, using the two single-system calculations described above. If the phase space volume of a system is known, our method can be used to calculate its absolute (versus relative) free energy as well. We apply our method and demonstrate its efficiency on a “toy model” of hard rods on a 1-dimensional ring.
Keywords:Free energy difference  Equilibrium method  Alchemical free energy  Temperature Integration  Parallel Tempering  Cutoff
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