Metal‐Ion‐Triggered Exonuclease III Activity for the Construction of DNA Colorimetric Logic Gates |
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Authors: | Wan Gao Dr Li Zhang Prof Ru‐Ping Liang Prof Jian‐Ding Qiu |
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Institution: | College of Chemistry, Nanchang University, Nanchang 330031 (P.R. China), Fax: (+86)?791‐8396‐9518 |
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Abstract: | The logic system is obtained by using a series of double‐stranded (ds) DNA templates with mismatched base pairs (T–T or C–C) and ion‐modulated exonuclease III (Exo III) activity, in which the Exo III cofactors, Hg2+ and Ag+ ions, are used as inputs for the activation of the respective scission of Exo III based on the formation of T–Hg2+–T or C–Ag+–C base pairs. Additionally, two kinds of signal probes are utilized to transduce the logic operations. One is the two split G‐rich DNA strands that are used to design the OR, AND, INHIBIT, and XOR gates, whereas the other is the self‐assembled split G‐quadruplex structure to construct NOR, NAND, IMPLICATION, and XNOR operations based on DNA hybridization and strand displacement. In the presence of hemin, the split G‐quadruplex biocatalyzes the formation of a colored product, which is an output signal for the different logic gates. Thus, we have constructed a complete set of colorimetric DNA logic gates based on the Exo III and split G‐quadruplex for the first time. In addition, we are able to effortlessly recognize the logic output signals by the naked eye and their simplicity and cost‐effective design is the most apparent feature for the logic gates developed in this work. |
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Keywords: | biocatalysis DNA enzymes G‐quadruplexes molecular electronics silver |
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