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Regulated Incorporation of Two Different Metal Ions into Programmed Sites in a Duplex by DNA Polymerase Catalyzed Primer Extension
Authors:Tatsuya Funai  Junko Nakamura  Yuki Miyazaki  Risa Kiriu  Dr Osamu Nakagawa  Dr Shun‐ichi Wada  Prof Akira Ono  Prof Hidehito Urata
Institution:1. Osaka University of Pharmaceutical Sciences, 4‐20‐1 Nasahara, Takatsuki, Osaka 569‐1094 (Japan);2. Department of Material & Life Chemistry, Faculty of Engineering, Kanagawa University, 3‐27‐1 Rokkakubashi, Kanagawa‐ku, Yokohama 221‐8686 (Japan)
Abstract:Metal‐mediated base pairs formed by the coordination of metal ions to natural or artificial bases impart unique chemical and physical properties to nucleic acids and have attracted considerable interest in the field of nanodevices. AgI ions were found to mediate DNA polymerase catalyzed primer extension through the formation of a C–AgI–T base pair, as well as the previously reported C–AgI–A base pair. The comparative susceptibility of dNTPs to AgI‐mediated enzymatic incorporation into the site opposite cytosine in the template was shown to be dATP>dTTP?dCTP. Furthermore, two kinds of metal ions, AgI and HgII, selectively mediate the incorporation of thymidine 5′‐triphosphate into sites opposite cytosine and thymine in the template, respectively. In other words, the regulated incorporation of different metal ions into programmed sites in the duplex by DNA polymerase was successfully achieved.
Keywords:DNA polymerase  DNA structures  mercury  metal‐mediated base pairing  silver
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