Charge transport in a polypeptide chain

Charge transport is one important example of signal transduction in a protein which is responsible for action at a distance, and is a fundamental process in biochemical action. A model is presented in which electronic effects interact with motional processes to combine into a bifunctional model. This model is investigated with new detailed molecular dynamics calculations and successfully explains such action at a distance. Received 1st February 2002 / Received in final form 26 May 2002 Published online 13 September 2002     

Dynamics of molybdenum nano structure formation on the TiO2(1 1 0) surface: A kinetic Monte Carlo approach

The rutile TiO₂(1 1 0) surface is a highly anisotropic surface exhibiting “channels” delimited by oxygen rows. In previous experimental and theoretical DFT works we could identify the molybdenum adsorption sites. They are located inside the channels. Moreover, experimental studies have shown that during subsequent annealing after deposition, special molybdenum nano structures can be formed, especially two monolayer high pyramidal chains of atoms.In order to better understand the dynamics of nano structure formation, we present a kinetic Monte Carlo study on diffusion and adsorption of molybdenum atoms on a TiO₂(1 1 0) surface. A quasi one-dimensional lattice gas model has been used which describes the possible adsorption sites of a Mo atom in a single channel of the surface. The atomic positions of a 1.5 monolayer thick Mo film formed of pyramidal chains define the lattice sites of the model. Thereby the formation of three-dimensional clusters could be studied. Here we have studied the cluster formation as a function of parameters that can be controlled in a growth experiment by physical vapor deposition: deposition and annealing temperature, flux and total amount of deposited Mo. Good qualitative agreement with recent experiments is obtained.     

Electromagnetic properties of strange baryons in a relativistic quark model

We present some of our results for the electromagnetic properties of excited Σ hyperons, computed within the framework of the Bonn constituent-quark model, which is based on the Bethe-Salpeter approach. The seven parameters entering the model are fitted against the best-known baryon masses. Accordingly, the results for the form factors and helicity amplitudes are genuine predictions. We compare with the scarce experimental data available and discuss the processes in which Σ ^*'s may play an important role.     

Preparation of activated carbons from cherry stones by activation with potassium hydroxide

Using cherry stones, the preparation of activated carbon has been undertaken in the present study by chemical activation with potassium hydroxide. A series of KOH-activated products was prepared by varying the carbonisation temperature in the 400-900 °C range. Such products were characterised texturally by gas adsorption (N₂, −196 °C), mercury porosimetry, and helium and mercury density measurements. FT-IR spectroscopy was also applied. The carbons prepared as a rule are microporous and macroporous solids. The degree of development of surface area and porosity increases with increasing carbonisation temperature. For the carbon heated at 900 °C the specific surface area (BET) is 1624 m² g⁻¹, the micropore volume is 0.67 cm³ g⁻¹, the mesopore volume is 0.28 cm³ g⁻¹, and the macropore volume is 1.84 cm³ g⁻¹.     

Catalytic supports on the base of activated anthracites and synthetic carbons

Selective adsorption of platinum group metals (PMG) on activated carbons from a multi-component model and technological solutions was proposed for the preparation of heterogeneous-supported catalysts. Activated natural anthracites and a nitrogen-containing synthetic carbon are considered as carriers for Pd-supported catalysts. Their catalytic activity was studied in the Pd-catalyzed reactions of hydrogen peroxide decomposition and chloride ions oxidation by manganese(III). On the base of the obtained results, novel high sensitive analytical methods both for direct determination of supported-metal quantity and palladium oxidation states on the surface of spent adsorbents are suggested.     

Superheating in linear polymers studied by ultrafast nanocalorimetry

To study phase transition kinetics on submillisecond time scale a sensitive ultrafast nanocalorimeter was constructed. Controlled ultrafast cooling, as well as heating, up to 10⁶K/s was attained. The method was applied for the measurements of the superheating phenomenon in a set of linear polymers: iPS, PBT, PET, and iPP. A power law relation between the superheating and the heating rate holds in the heating rate range 10^-2-10⁴K/s. A limiting superheating of about 10% of the melting temperature was observed at rates above 10⁴-10⁵K/s. This limit depends on annealing conditions before sample melting. The observed superheating limit, as well as the power law, can be accounted for the internal stresses near the crystalline amorphous interface in semicrystalline polymers induced by heating, which are related to the thermal expansion gradients inherent in a semicrystalline material.     

Three-body hadronic structure of low-lying 1/2+ Σ and Λ resonances⋆

We discuss the dynamical generation of some low-lying 1/2⁺ Σ 's and Λ 's in two-meson one-baryon systems. These systems have been constructed by adding a pion in the S -wave to the ˉN pair and its coupled channels, where the 1/2^- Λ(1405) -resonance gets dynamically generated. We solve Faddeev equations in the coupled-channel approach to calculate the T -matrix for these systems as a function of the total energy and the invariant mass of one of the meson-baryon pairs. This squared T -matrix shows peaks at the energies very close to the masses of the strangeness -1 , 1/2⁺ resonances listed in the particle data book.     

The timescale of spinodal dewetting at a polymer/polymer interface

We investigate the dynamics of spinodal dewetting in liquid-liquid polymer systems. Dewetting of poly(methyl-methacrylate) (PMMA) thin films on polystyrene (PS) “substrates” is followed in situ using neutron reflectivity. By following the development of roughness at the PS/PMMA interface and the PMMA surface we extract characteristic growth times for the dewetting process. These characteristic growth times are measured as a function of the molecular weight of the two polymers. By also carrying out experiments in the regime where the dynamics are independent of the PS molecular weight, we are able to use dewetting to probe the scaling of the PMMA thin film viscosity with temperature and molecular weight. We find that this scaling reflects bulk behaviour. However, absolute values are low compared to bulk viscosities, which we suggest may be due in part to slippage at the polymer/polymer interface. Received 25 June 2001 and Received in final form 5 December 2001     

The hydrogenated aluminium trimer: a theoretical examination of the formation and interconversion pathways

Five doublet isomers of the Al₃H₂ cluster lying within a narrow range of 5 kcal/mol, along with the isomerization transition states connecting them, have been located with the coupled-cluster CCSD(T) and DFT methods. The two most stable doublet structures, the C_2v planar including the two Hs bound terminally and C₁ non-planar showing one H in terminal site and the other in threefold site are found to be essentially degenerate. Although the reaction of Al₃ with H₂ to yield Al₃H₂ is found to be significantly exothermic, by 23.5 kcal/mol, this hydrogenation is impeded by a considerable kinetic barrier of 16 kcal/mol. Our result is consistent with the observed lack of reactivity of Al_n towards H₂(D₂) for n=3 under thermal conditions [3]. The quartet Al₃H₂ isomers are predicted to lie 16–21 kcal/mol higher in energy than the doublet analogues. Further dimerization of Al₃H₂ to form Al₆H₄ has also been examined. Electronic supplementary material Supplementary Online Material     

Initial growth of Boltzmann entropy and chaos in a large assembly of weakly interacting systems

We introduce a high-dimensional symplectic map, modeling a large system, to analyze the interplay between single-particle chaotic dynamics and particles interactions in thermodynamic systems. We study the initial growth of the Boltzmann entropy, S_B, as a function of the coarse-graining resolution (the late stage of the evolution is trivial, as the system is subjected to no external drivings). We show that a characteristic scale emerges, and that the behavior of S_B vs t, at variance with the Gibbs entropy, does not depend on the resolution, as far as it is finer than this scale. The interaction among particles is crucial to achieve this result, while the rate of entropy growth, in its early stage, depends essentially on the single-particle chaotic dynamics. It is possible to interpret the basic features of the dynamics in terms of a suitable Markov approximation.