Theory of chemical bonds in metalloenzymes XXII: a concerted bond-switching mechanism for the oxygen–oxygen bond formation coupled with one electron transfer for water oxidation in the oxygen-evolving complex of photosystem II

ABSTRACT

QM(UB3LYP)/MM(AMBER) calculations were performed for the locations of the transition structure (TS) of the oxygen–oxygen (O–O) bond formation in the S₄ state of the oxygen-evolving complex (OEC) of photosystem II (PSII). The natural orbital (NO) analysis of the broken-symmetry (BS) solutions was also performed to elucidate the nature of the chemical bonds at TS on the basis of several chemical indices defined by the occupation numbers of NO. The computational results revealed a concerted bond switching (CBS) mechanism for the oxygen–oxygen bond formation coupled with the one-electron transfer (OET) for water oxidation in OEC of PSII. The orbital interaction between the σ-HOMO of the Mn(IV)₄–O₍₅₎ bond and the π*-LUMO of the Mn(V)₁=O₍₆₎ bond plays an important role for the concerted O–O bond formation for water oxidation in the CaMn₄O₆ cluster of OEC of PSII. One electron transfer (OET) from the π-HOMO of the Mn(V)₁=O₍₆₎ bond to the σ*-LUMO of the Mn(IV)₄–O₍₅₎ bond occurs for the formation of electron transfer diradical, where the generated anion radical [Mn(IV)₄–O₍₅₎]^-? part is relaxed to the ?Mn(III)₄?…?O₍₅₎^- structure and the cation radical [O₍₆₎=Mn(V)₁]⁺ ? part is relaxed to the ⁺O₍₆₎–Mn(IV)₁? structure because of the charge-spin separation for the electron-and hole-doped Mn–oxo bonds. Therefore, the local spins are responsible for the one-electron reductions of Mn(IV)₄->Mn(III)₄ and Mn(V)₁->Mn(IV)₁. On the other hand, the O₍₅₎^- and O₍₆₎⁺ sites generated undergo the O–O bond formation in the CaMn₄O₆ cluster. The Ca(II) ion in the cubane- skeleton of the CaMn₄O₆ cluster assists the above orbital interactions by the lowering of the orbital energy levels of π*-LUMO of Mn(V)₁=O₍₆₎ and σ*-LUMO of Mn(IV)₄–O₍₅₎, indicating an important role of its Lewis acidity. Present CBS mechanism for the O–O bond formation coupled with one electron reductions of the high-valent Mn ions is different from the conventional radical coupling (RC) and acid-base (AB) mechanisms for water oxidation in artificial and native photosynthesis systems. The proton-coupled electron transfer (PC-OET) mechanism for the O–O bond formation is also touched in relation to the CBS-OET mechanism.     

Polarization inscription in ferroelectric (111) PZT and (100) SBT films

Ferroelectric thin films form an equilibrium domain structure compatible with their respective crystallographic symmetry. In tetragonal (111) PZT, 90° domains prevail; in (pseudo-tetragonal) (100) SBT both 90° and 180° domains are present. The size of 90° domains has been measured for e.g., PZT as slabs of 15 nm width. Domain size is a result of stress minimization in the film during the paraelectric (PE) → ferroelectric (FE) transition. A precise and regular domain pattern for (111) PZT and (100) SBT films has been investigated in detail by TMSFM. Single domains can be addressed mechanically with the tip of an AFM. Such single domain switching corresponds to a data storage density of 200 Gbit/inch². Applications of ferroelectric and high- paraelectric materials for e.g., non-volatile data storage replacing DRAM devices or as sensors in infrared cameras are increasingly becoming popular.     

Limit Regimes of Braking of Disc-Type Composite Flywheels Made by Filament Winding

A set of invariants describing the limit regimes of braking disk-type wound composite flywheels is suggested. The limit regime is determined by using a linear failure criterion. It is shown that, for generating short-time impulses of very high power, a set of small identical flywheels is more effective than one large flywheel with an equivalent mass. Particular examples illustrating the theory considered are discussed.     

D—^3He聚变动力可行性研究

本文首先简要地讨论D-3He聚变的物理要求并与D-T聚变作相应的比较,然后运用目前的约束定律和第一稳定区β极限,对计划的近期ETR规模装置(如CIT,TIBER,FER,NET)进行D-3He得失相当和点火实验的可行性研究,并对高径比第二稳定区D-3He托卡马克堆进行参数学研究,最后指出潜在的缩短商用化进程可能性。     

Boundary-Value Problem of Drainage in a Fresh Groundwater Fringe above Saline Groundwater

A multiparameter boundary-value problem of fresh infiltration water seepage in a drained fringe above quiescent saline water is solved in the direct statement and studied in detail.     

A new type of two-dimensional packed + capillary column GC system. I. Theory

Summary To match the need of high efficiency capillary column (plate number N₂, Plate height H₂ and carrier gas linear velocity U₂), a new high efficiency packed column (N₁, H₁ and U₁) at high carrier gas velocity with small capacity factor has been developed in the light of theoretical discussion of factors effecting the column efficiency utilization ratio.     

Fast sample preparation involving MASE and coupled column normal phase liquid chromatography for the rapid trace analysis of dioxins in air-dust samples from fire catastrophe emissions

A new approach has been developed and tested for the urgent analysis of dioxins in samples of air-dust filters originating from catastrophe emissions. The procedure consists of a fast extraction of the sample with microwave solvent extraction (MASE) and acetone as solvent followed by a fast cleanup of the extract with normal phase coupled column liquid chromatography (LC/LC).

The multi-dimensional LC/LC system employs a 50 mm×4.6 mm i.d. column packed with 3 μm silica and a 150 mm×4.6 mm i.d. column packed with 5 μm PYE as the first and second analytical column, respectively. Iso-hexane is used on both columns to perform cleanup and dichloromethane to perform efficient back-flush elution of the compounds from the second column. The obtained polarity-based separation in the first dimension and molecular-structure based separation in the second dimension provides a fast and powerful cleanup.

Validation was done by analysing samples of homemade RIVM air-dust with aged residues (n=8, spiking level about 15 pg mg⁻¹ per compound) of dioxins/furans and samples of reference Urban Dust SRM 1649a (n=4) with both the new approach and the existing conventional procedure and were instrumentally analyzed with capillary gas chromatography and high resolution mass spectrometric detection (GC/HRMS).

In comparison to the existing conventional procedure, the new approach reduces sample processing from several days to several hours per sample.

As regards the aged-residue air-dust samples, the new method shows a good accuracy, precision and high selectivity providing a performance in good agreement with the existing procedure. In SRM air-dust, the concentration of a few compounds obtained by the new method was below (10–50%) the certified value.     

Heat transfer from a rarefied plasma flow to a metallic or nonmetallic particle

Heat transfer from a plasma flow to a metallic or nonmetallic spherical particle is studied in this paper for the extreme case of free-molecule flow regime. Analytical expressions are derived for the heat flux due to, respectively, atoms, ions, and electrons and for the floating potential on the sphere exposed to a two-temperature plasma flow. It has been shown that the local or average heat flux density over the whole sphere is independent of the sphere radius and approximately in direct proportion to the gas pressure. The presence of a macroscopic relative velocity between the plasma and the sphere causes substantially nonuniform distributions of the local heat flux and enhances the total heat flux to the sphere. The heat flux is also enhanced by the gas ionization. Appreciable difference between metallic and nonmetallic spheres is found in the distributions along the oncoming flow direction of the floating potential and of the local heat flux densities due to ions and electrons. The total heat flux to the whole sphere is, however, almost the same for these different spheres. For a fixed value of the electron temperature, the heat flux decreases with increasing temperature ratio T_e/T_h.     

Influence of the composition of perovskites based on SrMnO<Subscript>3</Subscript> on their catalytic properties in the oxidative coupling of methane

The oxidative coupling of methane (OCM) in a periodic regime over the SrMnO₃ and its derivatives has been investigated. It has been established that partial replacement of the strontium ion by alkali metal ions leads to an increase in both catalytic activity and in selectivity with respect to higher hydrocarbons. Comparison of the results obtained in the present work with those obtained earlier for catalysts based on SrCoO₃ led to the conclusion that the Co-containing catalysts were preferable to the Mn-containing catalysts for carrying out oxidative coupling of methane in a periodic regime.__________Translated from Teoreticheskaya i Éksperimentalnaya Khimiya, Vol. 41, No. 1, pp. 30–34, January–February, 2005.