用不同蛋白质分析方法鉴定玉米分泌蛋白组的比较研究

玉米根系在生长过程中向根际分泌蛋白质类大分子物质。采用双向聚丙烯酰胺凝胶电泳-质谱技术,一维液相色谱-质谱联用(LC/MS)和Shotgun三种不同鉴定方法对无菌条件收集的玉米根系分泌蛋白进行了分离、分析与鉴定,对3种鉴定方法在分泌蛋白分析中的应用做了详细阐述和比较。结果表明,双向电泳通过银染可以看到200个蛋白质点,但由于蛋白量少,通过质谱无法对玉米根系分泌蛋白进行鉴定;用LC/MS鉴定得到了152个蛋白;用Shotgun技术鉴定得到了2 848个蛋白。LC/MS鉴定得到的蛋白全部出现在用Shotgun技术鉴定得到的2 848个蛋白中,后2种方法的结果可以互相验证。Shotgun技术具有更高的灵敏性,更适合对蛋白质浓度低、干扰物多的植物根分泌蛋白组进行鉴定,能够获得完整可靠的信息。     

多维高效液相色谱/毛细管电泳模式在蛋白组研究中的应用

对多维高效液相色谱/毛细管电泳模式的发展及其在蛋白质和多肽分析中的应用进行了系统综述。该模式具有快速、重现性好、易于实现自动化的优点,很容易实现和质谱的联用,对于在样品中丰度低和疏水性强的蛋白质的分析也具有明显的优势。引文67篇。     

非标记液相色谱-质谱联用蛋白组学并行分析策略研究

在双酶双碎裂条件下,建立了针对非标记液相色谱-质谱联用蛋白质组学的并行分析策略.应用拥有碰撞诱导解离(CID)和电子转移解离(ETD)两种碎裂方式的液相色谱-质谱联用对经胰蛋白酶和V8酶分别酶解的牛血清白蛋白(BSA)、大肠杆菌及复杂血清样品进行检测.与单酶酶解比较,双酶酶解的蛋白总发现率增加了11%,蛋白总覆盖率可增...     

铬胁迫对西红花叶片蛋白表达谱的影响

铬是植物的非必需元素，对植物的生长发育具有显著的抑制作用.采用双向电泳和质谱技术，研究了铬胁迫对西红花叶片蛋白表达的影响.通过质谱技术，成功鉴定出9个在铬胁迫后下调表达的蛋白，分别为细胞分裂循环蛋白48、ATP合成酶α亚基、核酮糖二磷酸羧化酶长链（2个）、未知蛋白、核酮糖二磷酸羧化加氧酶、蛋白酶体α亚基、铁蛋白和蛋白酶体β亚基；6个上调表达的蛋白，分别为蔗糖合酶、真核起始因子4A、α-1，4-葡聚糖蛋白合成酶、1-氨基环丙烷-1-羧酸氧化酶、异黄酮还原酶类似物IRL和未知蛋白.以上结果为研究植物响应铬胁迫的分子机制提供了参考.     

4D-proteomics-based breast cancer progressionEI北大核心CSCD

：The occurrence and development of breast cancer go through multiple processes，and the protein molecular information in its evolution is intricate and complex. The 4D-proteomics technique was used to investigate the tumor progression of MMTV-PyMT transgenic mice. The results of protein identification and differential expression analysis showed that a total of 5819 proteins were identified in 4D-proteomics analysis and 5667 proteins were quantifiable. Compared with 3-week-old tumors，a total of 270 differentially expressed proteins were found in the 5-week-old tumors，while 255 proteins in the 7-week-old tumors. We also detected 23 of proteins （such as，Srpk11 and Tinagl1）with gradual up-regulation and 35 of proteins （such as，Pdgfrb， Col1a2 and Col1a1）with gradual down-regulation during the tumor progression，including 3-，5-and 7-weeks. We also performed bioinformatics analysis，including subcellular localization，GO function analysis and pathway enrichment analysis. The results showed that the biological processes（immune regulation and lipid metabolism） and enrichment pathways （metabolic pathway）involved in differentially expressed proteins remained the same during the tumor progression，but some cellular components and molecular functions changed，such as，protein locations were extracellular region and membrane in 5-weeks-old tumors as well as cytoplasm in 7-weeks-old tumors. And important protein functions were protein binding functions in 5-weeks-old tumors as well as nucleotide binding in 7-weeks-old tumors. The acquired protein biomarkers and pathways could help with the accurate exploration of molecular mechanisms of tumor progression，screening of molecular targets of breast cancer，and evaluation of personalized treatment programs. © 2023, Youke Publishing Co.,Ltd. All rights reserved.