An optical surface plasmon resonance biosensor for determination of tetanus toxin

Surface plasmon resonance (SPR) has been successfully applied for the simple, rapid, and label-free assay of various biomolecules. This assay evaluates a novel wavelength modulation SPR biosensor for the detection of tetanus toxin. The wavelength modulation SPR biosensor is designed based on fixing the incident angle of light and measuring the reflected intensities in the resonance wavelength range spanning 400-800 nm simultaneously. Tetanus toxin (TeNT), one of the most potent toxins known, is synthesized as a 150 kDa single polypeptide chain. The SPR biosensor has been shown to be capable of directly detecting concentration of tetanus toxin as low as 0.028 Lf ml⁻¹. Under selected experimental conditions, the SPR biosensor has a good reproducibility, sensitivity and reversibility. The results illustrate how wavelength modulation SPR biosensor can be used to detect biomolecular interactions.     

Voltammetric Behavior of Arsenic(III) in the Presence of Sodium Diethyl Dithiocarbamate and Its Determination in Water and Highly Saline Samples by Adsorptive Stripping Voltammetry

This paper describes the voltammetric behavior of As(III) at the hanging mercury drop electrode (HMDE) in the presence of sodium diethyl dithiocarbamate (SDDC) and a new voltammetric method for the determination of As(III) at trace levels. The method is based on the adsorptive deposition of a As(III) complex with SDDC at ?0.45 V (vs. Ag/AgCl) on the HMDE in acidic medium of 0.01 mol L^?1 HCl (pH 2.0) and its cathodic stripping during the potential scan (100 mV s^?1). The linear range for the determination of As(III) in the presence of SDDC (4 μmol L^?1) in water samples was between 1 and 10 μg L^?1 for a deposition time of 300 s (r=0.994) and between 10 and 100 μg L^?1 for a deposition time of 60 s (r=0.999). For the determination of As(III) in dialysis concentrate samples, the linear range was between 5 and 25 μg L^?1 for a deposition time of 180 s (r=0.992) and between 10 and 100 μg L^?1 for a deposition time of 60 s (r=0.996). Detection limits of 0.3 and 2.2 μg L^?1 in water and dialysis concentrate samples were calculated for the method using a deposition time of 300 and 180 s, respectively. Recovery values between 93.0 and 110.0% for As(III) added to deionized, mineral, seawater (synthetic and real) and dialysis concentrate samples prove the satisfactory accuracy and applicability of the procedure.     

Optimized POCl3-assisted synthesis of 2-amino-1,3,4-thiadiazole/1,3,4-oxadiazole derivatives as anti-influenza agents

Although recent decades have witnessed the synthesis of 1,3,4-thiadiazoles via phosphorus POCl₃-promoted cyclization reaction, simultaneous access to 2-amino-1,3,4-thiadiazole and 2-amino-1,3,4-oxadiazole analogs remains unexpected and elusive. Herein, a detailed regiocontrolled synthesis of 2-amino-1,3,4-thiadiazoles in good to high yields with good regioselectivities from readily available thiosemicarbazides using POCl₃ was disclosed. Meantime, to establish a comprehensive structure–activity relationship, 2-amino-1,3,4-oxadiazole derivatives as single regioisomers were prepared via EDCI·HCl-triggered cyclization of the thiosemicarbazide intermediates. The in vitro anti-influenza assays proved that the selected compounds with the pyrazine/pyridine ring exhibited certain inhibitory activities against influenza A virus strains A/HK/68 (H3N2) and A/PR/8/34 (H1N1) in MDCK cells. Among them, N-(adamantan-1-yl)-5-(5-(azepan-1-yl)pyrazin-2-yl)-1,3,4-thiadiazol-2-amine (4j) was the most active compound, and exhibited favorable activity with EC₅₀ values of 3.5 μM and 7.5 μM, respectively. In addition, the molecular docking results explained the reason why compound 4j had dual inhibitory activity and revealed the reasonable binding mode of this compound with the M2-S31N and M2-WT ion channels. This compound had the potential to be further developed as an anti-influenza drug.     

Development and characterization of a magnetic bead-quantum dot nanoparticles based assay capable of Escherichia coli O157:H7 quantification

The development and characterization of a magnetic bead (MB)-quantum dot (QD) nanoparticles based assay capable of quantifying pathogenic bacteria is presented here. The MB-QD assay operates by having a capturing probe DNA selectively linked to the signaling probe DNA via the target genomic DNA (gDNA) during DNA hybridization. The signaling probe DNA is labeled with fluorescent QD₅₆₅ which serves as a reporter. The capturing probe DNA is conjugated simultaneously to a MB and another QD₆₅₅, which serve as a carrier and an internal standard, respectively. Successfully captured target gDNA is separated using a magnetic field and is quantified via a spectrofluorometer. The use of QDs (i.e., QD₅₆₅/QD₆₅₅) as both a fluorescence label and an internal standard increased the sensitivity of the assay. The passivation effect and the molar ratio between QD and DNA were optimized. The MB-QD assay demonstrated a detection limit of 890 zeptomolar (i.e., 10⁻²¹ mol L⁻¹) concentration for the linear single stranded DNA (ssDNA). It also demonstrated a detection limit of 87 gene copies for double stranded DNA (dsDNA) eaeA gene extracted from pure Escherichia coli (E. coli) O157:H7 culture. Its corresponding dynamic range, sensitivity, and selectivity were also presented. Finally, the bacterial gDNA of E. coli O157:H7 was used to highlight the MB-QD assay's ability to detect below the minimum infective dose (i.e., 100 organisms) of E. coli O157:H7 in water environment.     

The development of an integrated platform to identify breast cancer glycoproteome changes in human serum

Protein glycosylation represents one of the major post-translational modifications and can have significant effects on protein function. Moreover, changes in the carbohydrate structure are increasingly being recognized as an important modification associated with cancer etiology. In this report, we describe the development of a proteomics approach to identify breast cancer related changes in either concentration and/or the carbohydrate structures of glycoprotein(s) present in blood samples. Diseased and healthy serum samples were processed by an optimized sample preparation protocol using multiple lectin affinity chromatography (M-LAC) that partitions serum proteins based on glycan characteristics. Subsequently, three separate procedures, 1D SDS-PAGE, isoelectric focusing and an antibody microarray, were applied to identify potential candidate markers for future study. The combination of these three platforms is illustrated in this report with the analysis of control and cancer glycoproteomic fractions. Firstly, a molecular weight based separation of glycoproteins by 1D SDS-PAGE was performed, followed by protein, glycoprotein staining, lectin blotting and LC–MS analysis. To refine or confirm the list of interesting glycoproteins, isoelectric focusing (targeting sialic acid changes) and an antibody microarray (used to detect neutral glycan shifts) were selected as the orthogonal methods. As a result, several glycoproteins including alpha-1B-glycoprotein, complement C3, alpha-1-antitrypsin and transferrin were identified as potential candidates for further study.     

An adsorption study of Sr2+ from saline sources by coconut shell charcoal

The adsorption potential of charcoal for the removal of heavy metal ions is well documented in the literature. However, its exploration for uptake of technologically valuable metal ions such as Sr²⁺ is poorly known. In this work, the batch adsorption study of Sr²⁺ ion from aqueous solution as well as from saline matrix (>3% of NaCl) onto charcoal has been carried out. The experiments were conducted with two charcoals, i.e., our prepared charcoal (coconut shell charcoal) and commercial charcoal. Strontium adsorption has been investigated as a function of its initial concentration, contact time, and varied mass of adsorbent. Equilibrium adsorption data were evaluated for Langmuir and Freundlich isotherm models. The adsorption capacities (mg/g) of Sr²⁺ present in the salt matrix onto coconut shell charcoal and commercial charcoal was found to be 18.4 and 22.2, respectively. Uptake of Sr²⁺ from subsoil brine onto coconut shell charcoal has been successfully demonstrated in this work.     

美地那对土壤溶液含盐量变化的影响

在田间利用盐分传感器对土壤溶液电导率连续观测表明，施用美地那可在灌水期间增加表层，10cm,30cm，深土壤溶液盐分淋洗量，在未灌水期间抑制这些土层土壤溶液中盐分累积,60cm深土壤液电导率变化较以上土层缓和，田间施用美地那对该层土壤液含盐量影响不大。     

黄河三角洲盐生草甸白茅(Imperata cylindrica var. major)群落季节性动态的研究

采用定位研究的方法研究了生长季白茅(Imperata cylidrica var. major)群落的主要特征和动态。群落的种类组成较简单,其盖度一般在七月中旬达到100％。群落的高增长及地上生产量符合逻辑斯蒂增长模型(Logistic model),并主要受环境中水分和温度因子的影响。群落的最大高度为59cm,出现在八月中旬;地上生产量最大值为干重563g/m~2,出现在九月中旬。     

天然盐渍土冻融循环时水盐迁移规律及强度变化试验研究

通过对新疆喀什地区12处天然盐渍土室内基本性质试验分析,选取典型天然盐渍土,在开放系统中进行反复冻融循环条件下的试验研究。研究了天然盐渍土在多次冻融循环时的水分和盐分迁移规律及强度变化特征。试验结果表明:经多次冻融循环,低液限粘土试样水分重分布与盐分重分布有很大的一致性,水分和盐分自下而上迁移;试样粘聚力自下而上线形减小,内摩擦角呈s形分布。含砂低液限粘土试样冻融循环过程中,易溶盐均随水分向冷端面迁移,离子剖面呈现中间大两端小的趋势;试样粘聚力呈反s形分布,内摩擦角均呈s形分布。     

Interactions of DNA with graphene and sensing applications of graphene field-effect transistor devices: A review

Graphene field-effect transistors (GFET) have emerged as powerful detection platforms enabled by the advent of chemical vapor deposition (CVD) production of the unique atomically thin 2D material on a large scale. DNA aptamers, short target-specific oligonucleotides, are excellent sensor moieties for GFETs due to their strong affinity to graphene, relatively short chain-length, selectivity, and a high degree of analyte variability. However, the interaction between DNA and graphene is not fully understood, leading to questions about the structure of surface-bound DNA, including the morphology of DNA nanostructures and the nature of the electronic response seen from analyte binding. This review critically evaluates recent insights into the nature of the DNA graphene interaction and its affect on sensor viability for DNA, small molecules, and proteins with respect to previously established sensing methods. We first discuss the sorption of DNA to graphene to introduce the interactions and forces acting in DNA based GFET devices and how these forces can potentially affect the performance of increasingly popular DNA aptamers and even future DNA nanostructures as sensor substrates. Next, we discuss the novel use of GFETs to detect DNA and the underlying electronic phenomena that are typically used as benchmarks for characterizing the analyte response of these devices. Finally, we address the use of DNA aptamers to increase the selectivity of GFET sensors for small molecules and proteins and compare them with other, state of the art, detection methods.