GC–MS–MS analysis of bacterial fatty acids in heavily creosote-contaminated soil samples

Phospholipid fatty acid profiles of soil samples enable rapid and reproducible measurement and characterization of the dominant soil microbial communities. When extensive polycyclic aromatic hydrocarbon (PAH) pollution is present in the soil it is very difficult, or even impossible, to distinguish specific fatty acids in GC–MS chromatograms in full-scan mode, because of the PAHs which, because of their lipophilic character, are co-extracted with the lipids. Selected ions in the samples were scanned in MS–MS mode to eliminate the aromatic hydrocarbon signals and obtain clear chromatograms of the fatty acids. By using this technique it was possible to clearly distinguish at least eleven fatty acids in heavily creosote-contaminated soil samples (PAH concentration approximately 15 g kg⁻¹ dry weight of soil).     

Comparative chemical analysis of commercial creosotes and solvent refined coal-II materials by high resolution gas chromatography

The chemical composition of a commercially available creosote was compared to a direct coal liquefaction product, i.e., solvent refined coal-II fuel oil blend (SRC-II FOB) using high resolution gas chromatography (HRGC). In addition, hydrogenated products of these materials were studied. Samples were fractionated by chemical class on neutral alumina. Those fractions previously shown to be the most mutagenic and tumorigenic in laboratory bioassays of coal-derived materials were analyzed and compared by HRGC and gas chromatography/mass spectrometry (GC/MS). Individual components were tentatively identified and quantitated. Although similar chemical components were present in the creosote and SRC-II FOB fractions studied, the creosotes had higher concentrations of heavy molecular weight materials and a lower ratio of alkylated to parent polycyclic aromatic compounds than the coal liquefaction products. The creosote samples also had a significantly higher concentration of components which eluted in the polycyclic aromatic hydrocarbon (PAH) chemical class fraction. Amino-substituted PAH were present in both nonhydrogenated coal liquid and creosote materials. The creosote and SRC-II FOB crudes and nitrogen-containing polycyclic aromatic compound (NPAC) chemical class fractions expressed similar microbial mutagenicity. Based on chemical analysis data, the predicted tumorigenic potency of the creosote in laboratory bioassay systems would be equivalent to or greater than the SRC-II FOB.     

Compound-specific stable isotope analysis of organic contaminants in natural environments: a critical review of the state of the art,prospects, and future challenges

Compound-specific stable isotope analysis (CSIA) using gas chromatography-isotope ratio mass spectrometry (GC/IRMS) has developed into a mature analytical method in many application areas over the last decade. This is in particular true for carbon isotope analysis, whereas measurements of the other elements amenable to CSIA (hydrogen, nitrogen, oxygen) are much less routine. In environmental sciences, successful applications to date include (i) the allocation of contaminant sources on a local, regional, and global scale, (ii) the identification and quantification of (bio)transformation reactions on scales ranging from batch experiments to contaminated field sites, and (iii) the characterization of elementary reaction mechanisms that govern product formation. These three application areas are discussed in detail. The investigated spectrum of compounds comprises mainly n-alkanes, monoaromatics such as benzene and toluene, methyl tert-butyl ether (MTBE), polycyclic aromatic hydrocarbons (PAHs), and chlorinated hydrocarbons such as tetrachloromethane, trichloroethylene, and polychlorinated biphenyls (PCBs). Future research directions are primarily set by the state of the art in analytical instrumentation and method development. Approaches to utilize HPLC separation in CSIA, the enhancement of sensitivity of CSIA to allow field investigations in the µg L^–1 range, and the development of methods for CSIA of other elements are reviewed. Furthermore, an alternative scheme to evaluate isotope data is outlined that would enable estimates of position-specific kinetic isotope effects and, thus, allow one to extract mechanistic chemical and biochemical information.Abbreviations BTEX benzene, toluene, ethylbenzene, xylenes - MTBE methyl tert-butyl ether - PAHs polycyclic aromatic hydrocarbons - VOCs volatile compounds - PCBs polychlorinated biphenyls - CSIA compound-specific (stable) isotope (ratio) analysis - GC-IRMS, GC/IRMS or GCIRMS gas chromatography-isotope ratio mass spectrometry - GC-C-IRMS, GC/C/IRMS or GCC-IRMS gas chromatography-combustion-isotope ratio mass spectrometry - irmGC/MS isotope ratio monitoring gas chromatograph-mass spectrometry - GC/P/IRMS gas chromatography-pyrolysis-isotope ratio mass spectrometry (used for D/H) - KIE kinetic isotope effect - PSIA position-specific isotope analysis (for intramolecular isotope distribution) - SNIF-NMR site-specific natural isotopic fractionation by nuclear magnetic resonance spectroscopy     

XAS and microscopy studies of the uptake and bio-transformation of copper in Larrea tridentata (creosote bush)

Herein we present work directed toward understanding the mechanisms employed by Larrea tridentata (Creosote bush) to uptake and simultaneously defend against the presence of excess copper. The location and nature of copper in the plant have been studied on several length scales: greater than 10 μm (scanning electron microscopy), less than 10 μm (transmission electron microscopy) and atomic level structure and speciation (EXAFS and XANES). Two interesting results are apparent: creosote takes up or adsorbs copper from the soil in the Cu(II) oxidation state and transports it to the leaves where copper is found as Cu(I) and Cu(II). The transport agent appears to be a Cu phytochelatin. Additionally, creosote may be immobilizing and excreting copper via at least two additional mechanisms: storage of metals in vacuoles and excretion of copper into the sticky resinous substance found on the leaf surface. Creosote may also accumulate wind-blown particulates that can easily adhere to the resinous sticky surface of the plant. If, however, the particulates are <10 μm they may enter the leaf by respiration through the plant ‘stomata’ that have openings between 5 μm and 10 μm. As such, creosote may be a natural bio-indicator for airborne particulates that are <10 μm.