Crystallization of Arthrobacter sp. strain 1C N-(1-D-carboxyethyl)-L-norvaline dehydrogenase and its complex with NAD+

The novel NAD+-linked opine dehydrogenase from a soil isolate Arthrobacter sp. strain 1C belongs to an enzyme superfamily whose members exhibit quite diverse substrate specificites. Crystals of this opine dehydrogenase, obtained in the presence or absence of co-factor and substrates, have been shown to diffract to beyond 1.8 ? resolution. X-ray precession photographs have established that the crystals belong to space group P21212, with cell parameters a = 104.9, b = 80.0, c = 45.5 ? and a single subunit in the asymmetric unit. The elucidation of the three-dimensional structure of this enzyme will provide a structural framework for this novel class of dehydrogenases to enable a comparison to be made with other enzyme families and also as the basis for mutagenesis experiments directed towards the production of natural and synthetic opine-type compounds containing two chiral centres.     

Laser-induced fluorescence detection schemes for the analysis of proteins and peptides using capillary electrophoresis

Over the past few years, a large number of studies have been prepared that describe the analysis of peptides and proteins using capillary electrophoresis (CE) and laser-induced fluorescence (LIF). These studies have focused on two general goals: (i) development of automatic, selective and quick separation and detection of mixtures of peptides or proteins; (ii) generation of new methods of quantitation for very low concentrations (nm and subnanomolar) of peptides. These two goals are attained with the use of covalent labelling reactions using a variety of dyes that can be readily excited by the radiation from a commonly available laser or via the use of noncovalent labelling (immunoassay using a labelled antibody or antigen or noncovalent dye interactions). In this review article, we summarize the works which were performed for protein and peptide analysis via CE-LIF.     

Synthesis and evaluation of new lipomonosaccharide-imprinted polymers as MISPE supports

Molecular imprinted polymers (MIP) were prepared by the copolymerization of styrene (S) or methyl methacrylate (MMA) and methacrylic acid (MAA) using ethylene glycol dimethacrylate (EGDMA) as the crosslinker with molar ratios of [monomer]/[crosslinker] and [MAA]/[template] of 3:7 (to obtain a rigid structure) and 1:6 (to optimise hydrogen interactions), respectively. The polymerizations occurred in presence of the template molecule (MIP) - GlcNcouma - an amphiphilic monosaccharide. The same materials, non-imprinted polymers (NIP), were also prepared in absence of the template. These MIPs were characterized and used as SPE supports for selective enrichment. The results showed the correlation between retention efficiency and the porogen character of the polymerization solvent.     

Recent advances in amino acid analysis by capillary electrophoresis

Amino acids are studied extensively using capillary electrophoresis. In a previous article, we reviewed applications reported in the period 1999-early 2001 (Prata, C., Bonnafous, P., Fraysse, N., Treilhou, M., Poinsot, V., Couderc, F., Electrophoresis 2001, 22, 4129-4138). In this article we follow on with this review for the period end of 2001-beginning of 2003. We will report the developments of detection methods, separations of enantiomers, the new medical applications, and amino acids in food and plants. This review shows that CE is more and more important for the amino acid analysis.     

Capillary electrophoresis as a simple and sensitive method to study polysaccharides of Sinorhizobium sp. NGR234

We report the minimum amounts of polysaccharides (6.5 ng) that can be studied using capillary electrophoresis-laser-induced fluorescence (CE-LIF) and describe the separation of the various monosaccharides susceptible to occur in Sinorhizobium cell wall. On-gel hydrolysis of the polysaccharides is described. It allowed the easy and rapid determination of the monosaccharide composition of the excised lipopolysaccharides. The composition obtained fits with gas chromatography-mass spectrometry (GC-MS) results. This study underlines the simplicity of using CE-LIF, which remains an entirely "water medium" method, unlike GC-MS which is, in addition, less sensitive (at least 100-fold) than CE-LIF.     

Ferromagnetic hcp chromium in Cr/Ru(0001) superlattices

We report the first observation of a weak ferromagnetic state of Cr in Cr/Ru(0001) superlattices, based on magnetic hysteresis and corroborated by x-ray magnetic circular dichroism at the CrL(2,3) edges. In situ reflection high-energy electron diffraction, x-ray diffraction, and Cr K-edge polarized x-ray absorption investigations have shown that the Cr layers thinner than 8 angstroms adopt a slightly distorted hcp structure, accompanied by a large atomic volume expansion of up to 14% compared to the bcc packing volume. The expanded hcp structure clearly induces the observed ferromagnetism, in agreement with theory.     

Massively parallel LES of azimuthal thermo-acoustic instabilities in annular gas turbines

Increasingly stringent regulations and the need to tackle rising fuel prices have placed great emphasis on the design of aeronautical gas turbines, which are unfortunately more and more prone to combustion instabilities. In the particular field of annular combustion chambers, these instabilities often take the form of azimuthal modes. To predict these modes, one must compute the full combustion chamber, which remained out of reach until very recently and the development of massively parallel computers. In this article, full annular Large Eddy Simulations (LES) of two helicopter combustors, which differ only on the swirlers' design, are performed. In both computations, LES captures self-established rotating azimuthal modes. However, the two cases exhibit different thermo-acoustic responses and the resulting limit-cycles are different. With the first design, a self-excited strong instability develops, leading to pulsating flames and local flashback. In the second case, the flames are much less affected by the azimuthal mode and remain stable, allowing an acceptable operation. Hence, this study highlights the potential of LES for discriminating injection system designs. To cite this article: P. Wolf et al., C. R. Mecanique 337 (2009).     

On the relative impact of subgrid‐scale modelling and conjugate heat transfer in LES of hot jets in cross‐flow over cold plates

This work describes numerical simulations of a hot jet in cross‐flow with applications to anti‐ice systems of aircraft engine nacelles. Numerical results are compared with experimental measurements obtained at ONERA to evaluate the performances of LES in this industrial context. The combination of complex geometries requiring unstructured meshes and high Reynolds number does not allow the resolution of boundary layers so that wall models must be employed. In this framework, the relative influence of subgrid‐scale modelling and conjugate heat transfer in LESs of aerothermal flows is evaluated. After a general overview of the transverse jet simulation results, a LES coupled with a heat transfer solver in the walls is used to show that thermal boundary conditions at the wall have more influence on the results than subgrid scale models. Coupling fluid flow and heat transfer in solids simulations is the only method to specify their respective thermal boundary conditions. Copyright © 2011 John Wiley & Sons, Ltd.