Ordering of structural vacancies in vanadium monoxide of substoichiometric composition

The order-disorder phase transition in vanadium monoxide of substoichiometric compositions VO_y has been studied for the first time in situ by the Faraday method with a pendulum magnetic balance of the Domenically type. A minimum is found on the temperature dependence of the magnetic susceptibility of vanadium monoxide of different compositions at a temperature of about 700 K. X-ray diffraction analysis performed before and after measuring the magnetic susceptibility confirmed the change in the structure of vanadium monoxide and the possibility of atom-vacancy processes upon cooling and heating of the samples.     

A theory of pseudo-differential boundary value problems with discontinuous conditions I

Summary The paper deals with mixed boundary value problems and transmission problems for elliptic differential and pseudo-differential operators. These problems are considered as elements of an algebra (where is the considered domain, x=, YX a submanifold of codimension 1, where the conditions have a jump, and x is a certain compactification of X/Y), the elements of which are described on a symbolic level. By means of additional conditions (of trace and potential type, with respect to Y) a given mixed problem is extended to an operator, and the Fredholm property of is established under an ellipticity condition, the parametrix is constructed on symbolic level and ind is expressed. In the second part the authors also study classes of special cases, namely differential operators of second and higher order with mixed boundary conditions for dim 2, where explicit index expressions are derived.     

Determination of affinity constants and response factors of the noncovalent dimer of gramicidin by electrospray ionization mass spectrometry and mathematical modeling

The dimerization of gramicidin, a 15-residue membrane peptide, in solution can be viewed as a model for protein-protein interactions. We reported previously that the dimer can be observed when electrosprayed from organic solvents and that the abundances of the dimer depends on the dielectric constant of the solvent. Here, we report an effort to determine an affinity constant for the dimerization of gramicidin by using gas-phase abundance. Two issues affecting the determination are the electrospray-induced dissociation of the dimer and discrimination in the electrospray of the dimer compared with the monomer. Other methods developed for the purpose of determining affinity from mass spectral abundance do not address the dissociation of the complex in the gas phase or can not be applied for cases of low affinity constant, K(a). We present a mathematical model that uses the ratio of the signal intensities of the dimer and the monomer during a titration. The model also incorporates the dissociation and an electrospray ionization-response factor of the dimer for extracting the affinity constant for the dimerization of gramicidin. The dimerization constants from the new method agree within a factor of two with values reported in the literature.     

Stability of Defectless Structures of Titanium Monoxide at High Pressures

JETP Letters - Titanium monoxide with the basis crystal structure B1 is of interest because of an anomalously high concentration of vacancies and diverse effects of atom–vacancy ordering. It...     

Hybrid nanoparticles based on sulfides,oxides, and carbides

The methods for synthesis of hybrid nanoparticles based on sulfides, oxides, and carbides of heavy and transition metals were considered. The problem of the influence of the method of synthesis of the hybrid nanoparticles on their atomic structure, morphology of the nanomaterials, and functional properties was analyzed. The areas of practical use of the hybrid nanoparticles were proposed.     

Fast Photochemical Oxidation of Proteins (FPOP) Maps the Epitope of EGFR Binding to Adnectin

Epitope mapping is an important tool for the development of monoclonal antibodies, mAbs, as therapeutic drugs. Recently, a class of therapeutic mAb alternatives, adnectins, has been developed as targeted biologics. They are derived from the 10th type III domain of human fibronectin (¹⁰Fn3). A common approach to map the epitope binding of these therapeutic proteins to their binding partners is X-ray crystallography. Although the crystal structure is known for Adnectin 1 binding to human epidermal growth factor receptor (EGFR), we seek to determine complementary binding in solution and to test the efficacy of footprinting for this purpose. As a relatively new tool in structural biology and complementary to X-ray crystallography, protein footprinting coupled with mass spectrometry is promising for protein–protein interaction studies. We report here the use of fast photochemical oxidation of proteins (FPOP) coupled with MS to map the epitope of EGFR-Adnectin 1 at both the peptide and amino-acid residue levels. The data correlate well with the previously determined epitopes from the crystal structure and are consistent with HDX MS data, which are presented in an accompanying paper. The FPOP-determined binding interface involves various amino-acid and peptide regions near the N terminus of EGFR. The outcome adds credibility to oxidative labeling by FPOP for epitope mapping and motivates more applications in the therapeutic protein area as a stand-alone method or in conjunction with X-ray crystallography, NMR, site-directed mutagenesis, and other orthogonal methods. Figure

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High pressure trapping in Fourier transform mass spectrometry: A radiofrequency-only-mode event

A new event for the Fourier transform mass spectrometry (FTMS) sequence is developed and demonstrated. During this event, called a radiofrequency (RF)-only mode event, the typical passive cubic trap of a Fourier transform mass spectrometer is made to operate as an active quadrupole ion trap. The transition between active and passive modes is developed so that ion loss as a consequence of the transition can be held to 15% or less. The adduct of the ion-molecule reaction of the 1,3-butadiene radical cation and methyl vinyl ether was detected during the Rf-only-mode event at a helium pressure of ～1×10^?3 torr even though this adduct is not detectable under standard FTMS operating conditions.     

A Mechanism for Poor High Mass Performance in Fourier Transform Mass Spectrometry

The discovery of a mass-dependent electrical mechanism for signal loss of high mass ions in Fourier transform mass spectrometry is reported. Theoretical calculations and experimental evidence show the existence of resonances involving the z-motion and radial motion of the ion. The resonances are intrinsic in the cubic trap. This results in energy transfer between modes, expansion of the ion cloud, and a corresponding loss of signal. Quadrupolar trapping potential wells are proposed as a solution.