Cinchona based squaramide catalysed enantioselective Michael addition of α-nitrophosphonates to aryl acrylates: enantioselective synthesis of quaternary α-aminophosphonates

Several cinchona based squaramide catalysts were applied to the asymmetric Michael addition of α-nitroethylphosphonates to acrylic acid aryl esters, resulting in high yields and enantioselectivities. The absolute configuration of one of the quaternary α-nitrophosphonate adducts was deduced from its experimental and calculated CD spectra. The adducts were reduced to their cyclic aminophosphonates by catalytic hydrogenation.     

The Mechanism of Biochemical NO-Sensing: Insights from Computational Chemistry

The binding of small gas molecules such as NO and CO plays a major role in the signaling routes of the human body. The sole NO-receptor in humans is soluble guanylyl cyclase (sGC) – a histidine-ligated heme protein, which, upon NO binding, activates a downstream signaling cascade. Impairment of NO-signaling is linked, among others, to cardiovascular and inflammatory diseases. In the present work, we use a combination of theoretical tools such as MD simulations, high-level quantum chemical calculations and hybrid QM/MM methods to address various aspects of NO binding and to elucidate the most likely reaction paths and the potential intermediates of the reaction. As a model system, the H-NOX protein from Shewanella oneidensis (So H-NOX) homologous to the NO-binding domain of sGC is used. The signaling route is predicted to involve NO binding to form a six-coordinate intermediate heme-NO complex, followed by relatively facile His decoordination yielding a five-coordinate adduct with NO on the distal side with possible isomerization to the proximal side through binding of a second NO and release of the first one. MD simulations show that the His sidechain can quite easily rotate outward into solvent, with this motion being accompanied in our simulations by shifts in helix positions that are consistent with this decoordination leading to significant conformational change in the protein.     

Paving Hessenberg varieties by affines

Regular nilpotent Hessenberg varieties form a family of subvarieties of the flag variety arising in the study of quantum cohomology, geometric representation theory, and numerical analysis. In this paper we construct a paving by affines of regular nilpotent Hessenberg varieties for all classical types, generalizing results of De Concini–Lusztig–Procesi and Kostant. This paving is in fact the intersection of a particular Bruhat decomposition with the Hessenberg variety. The nonempty cells of the paving and their dimensions are identified by combinatorial conditions on roots. We use the paving to prove these Hessenberg varieties have no odd-dimensional homology.      

Bemerkungen zur Bestimmung von Jodat- und Perjodationen nebeneinander

Zusammenfassung Bei der früher beschriebenen Bestimmungsmethode von Jodat- und Perjodationen nebeneinander kann als Reduktionsmittel für Hypobromit das Äthanol gleichwertig durch Harnstoff ersetzt werden.     

Proton-proton coupling constants in the unsubstituted pyrylium cation

An iterative analysis of the PMR spectrum of the title compound was performed and the calculated values of spectral parameters, relative chemical shifts, proton-proton and direct carbon-proton couplings are compared with those of pyridine.     

Hard-soft acid-base interactions of silylenes and germylenes

A detailed investigation of the electrophilic and nucleophilic character of singlet silylenes and germylenes, divalent compounds of silicon and germanium, respectively, substituted by first- and second-row elements is presented. In a first part, the Lewis acid properties of these compounds were studied through their complexation reaction with the Lewis bases NH3, PH3, and AsH3. The results indicate that this complexation is most favorable with the hardest base NH3, classifying these compounds as hard Lewis acids. This is confirmed by the linear correlation between the interaction energies and the value of the electrostatic potential, used as an approximation to the local hardness, near the empty p orbital of these compounds, indicating a charge-controlled interaction in the complex. Also the electrophilicity index, proposed by Parr et al., computed both at the global and the local level, correlates linearly with the complexation energies of the compounds with NH3. The Lewis base character of these silylenes has been investigated, through their interaction with the acids BH3 and AlH3. Also in this case, the electrostatic potential can be used to probe the reactivity of the compounds. It will finally be demonstrated that an increasing stability of the silylenes and germylenes is accompanied by an increase in their nucleophilicity and a decrease of the electrophilicity.     

Polymer encapsulation of yttrium oxysulfide phosphorescent particles via miniemulsion polymerization

Yttrium oxysulfide upconverting phosphor particles can absorb infrared light and emit dopant‐dependent visible phosphorescence. This unique optical property has been used for particle‐based immunoassay applications. In this study, upconverting phosphor particles were encapsulated with a functionalized polymer (carboxylated polystyrene) shell layer via several approaches, which included the following: (1) the physical adsorption of the carboxylated polystyrene polymer onto the phosphor surfaces, (2) the miniemulsification of the preformed carboxylated polystyrene in a solvent in the presence of the phosphor particles and the subsequent stripping off of the solvent, and (3) the miniemulsification and miniemulsion copolymerization of styrene and methacrylic acid in the presence of the phosphor particles with hexadecane as a costabilizer in combination with a surfactant (sodium dodecyl sulfate, sodium dodecylbenzene sulfonate, or sodium dihexyl sulfosuccinate). Miniemulsion technology proved to be the most effective method for forming a functionalized polymeric nanoshell surrounding the phosphor particles. The morphology of the encapsulated phosphor particles was found to vary from symmetric core–shell (i.e., a uniform nanoshell layer with varying shell thicknesses), asymmetric core–shell, dumbbell‐like, or raspberry‐like partial encapsulation to multiparticle encapsulation. The amount of multiparticle encapsulation could be reduced by the postaddition of a surfactant, but it could not be eliminated completely. © 2006 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 45: 1038–1054, 2007     

Decomposition of Complex Fluorescence Spectra Containing Components with Close Emission Maxima Positions and Similar Quantum Yields. Application to Fluorescence Spectra of Proteins

Despite of widely application of multivariate analysis in chemometrics, problem of resolving closely positioned components in the fluorescence spectra remained unsolved, thus limiting the usage of fluorescence spectroscopy in analytical purpose. In this paper we have described a novel procedure, adapted especially for the analysis of complex fluorescence spectra with multiple, closely positioned components’ maxima. The method was first tested on the simulated spectra and then applied on the spectra of proteins whose fluorophores have similar properties of both the excitation and the emission spectra. In this paper, simple but efficient modification of the method was applied. Instead of analyzing full size emission matrix (12 spectra), 9 spectra wide windows were analyzed, and 4 factors (greatest possible number of factors with physical meaning both for actin and simulated spectra) were extracted in each pass. Obtained factor scores were grouped by using the K-means algorithm. Groups of factor scores obtained from K-means algorithm were passed through the one more factor analysis (FA) in order to find one factor that represents each group. Our approach provides resolution of extremely closed spectral components, which is a vital data for protein conformation analysis based on fluorescence spectroscopy.     

Ultrasound and ionic liquid: an efficient combination to tune the mechanism of alkenes epoxidation

In this proof of concept study, the advantageous properties of both H₂O₂/NaHCO₃/imidazole/Mn(TPP)OAc oxidation system and MOPyrroNTf₂ ionic liquid have been combined under ultrasonic irradiation to give an exceptionally favorable environment for Mn(TPP)OAc catalyzed olefin oxidations. The results reveal the crucial role played by the ultrasonic irradiations that influence drastically the oxidation process. In MOPyrroNTf₂ and under ultrasonic irradiation, the mechanism probably involves an oxo-manganyl intermediate at the expense of the classical bicarbonate-activated peroxide route.