Molecular mechanisms of visual excitation: A concatenation of nonlinear cellular processes

The mechanism of transduction in the photoreceptor remains the least understood link in the chain of molecular and cellular processes that are responsible for vision. This paper reviews the molecular species and processes involved in the absorption of light and subsequent biochemical responses of the photoreceptor cell. The cells' electrical response and the probable ionic basis of the response are described. We develop the outlines of a mechanistic model that attempts to link biochemical and electrophysiological responses of photoreceptors of the vertebrate retina.     

Solution of sparse quasi-square rectangular systems by Gaussian elimination

We present a general method for the linear least-squares solutionof overdetermined and underdetermined systems. The method isparticularly efficient when the coefficient matrix is quasi-square,that is when the number of rows and number of columns is almostthe same. The numerical methods for linear least-squares problemsand minimum-norm solutions do not generally take account ofthis special characteristic. The proposed method is based onLU factorization of the original quasi-square matrix A, assumingthat A has full rank. In the overdetermined case, the LU factorsare used to compute a basis for the null space of A^T. The right-handside vector b is then projected onto this subspace and the least-squaressolution is obtained from the solution of this reduced problem.In the case of underdetermined systems, the desired solutionis again obtained through the solution of a reduced system.The use of this method may lead to important savings in computationaltime for both dense and sparse matrices. It is also shown inthe paper that, even in cases where the matrices are quite small,sparse solvers perform better than dense solvers. Some practicalexamples that illustrate the use of the method are included.     

CO-OPERATION OF PERIPHERAL AND INTEGRAL MEMBRANE PROTEINS IN THE LIGHT DEPENDENT ACTIVATION OF ROD GTPase AND PHOSPHODIESTERASE

Abstract— During the purification of light activated GTPase, we have observed that the GTPase activity is suddenly lost because of the separation of two components which are both needed for enzymatic activity. The G fraction or protein (apparent mol. wt 55000) can selectively bind GTP and is necessary for PDE activation by illuminated rhodopsin. However, the G fraction shows no GTPase activity unless it is supplemented by illuminated rhodopsin and the H fraction, a heat labile, trypsin resistant macro-molecule with an apparent mol. wt of 53 000. The G and H fractions (and GTPase activity) show a significant increase in binding to bleached as compared with unbleached disc membranes.     

Highest rotational and vibrational excitation of swift diatomic molecules scattered by solid surface

It is shown that at nondissociative scattering of swift molecules by solid surface and inverse population of the highest rotational and some vibrational states unattainable at thermal excitation could be achieved. For single crystal surface a specific polarization and orientational effects in rotational and vibrational excitation of the scattered molecules could be observed.     

The [Ru(CN)5(pyS)](4-) complex, an efficient self-assembled monolayer for the cytochrome c heterogeneous electron transfer studies

The organothiol 4-mercaptopyridine (pyS) has been used extensively as facilitator for the assessment of heterogeneous electron transfer reaction of cytochrome c (cyt c). Its efficiency, however, is strongly affected by the instability of the adlayer due to the C-S bond cleavage. The K(4)[Ru(CN)(5)(pyS)].3H(2)O complex was synthesized and characterized aiming its utilization as an inorganic self-assembled monolayer (SAM) that would enhance the gold adlayer stability. The SAM formed by this complex onto gold (RupySAu) was characterized by spectroscopic (FTIRRAS and SERS) and electrochemical (LSV) techniques. The ex situ vibrational SERS and FTIRRAS spectra data of this SAM formed onto gold suggest a sigma interaction between the gold and sulfur atoms of the complex, inducing a perpendicular arrangement in relation to the surface normal. Additionally, SERS and FTIRRAS spectra performed for freshly prepared RupySAu adlayer and for large immersion times in the precursor solution have not shown any significant change that would reflect the degradation of the adlayer. The LSV desorption curves of this SAM indicate an enhancement in the C-S bond strength of the pyS ligand when coordinated to the [Ru(CN)(5)](3-) moiety. Comparatively to the data obtained for the desorption process of the pyS monolayer, the reductive desorption potential, E(rd), of the RupySAu presents a shift of -17 mV. This bond strength intensification leads to an increase in the stability of the monolayer. The voltammetric curves of cyt c carried out with the RupySAu electrode showed electrochemical parameters consistent with those reported for the native protein, as well as the maintenance of the electrochemical kinetic data after repetitive cycles. The results all together suggest that the pi back-bonding effect from the [Ru(CN)(5)](3-) metal center plays an important role in the stability of the RupySAu adlayer, improving the assessment of the cyt c heterogeneous electron transfer reaction.     

Direct measurement of the impact of impaired erythrocyte deformability on microvascular network perfusion in a microfluidic device

The ability of red blood cells (RBCs, erythrocytes) to deform and pass through capillaries is essential for continual flow of blood in the microvasculature, which ensures an adequate supply of oxygen and nutrients, prompt removal of metabolic waste products, transport of drugs and hormones, and traffic of circulating cells to and from all living tissues. This paper presents a novel tool for evaluating the impact of impaired deformability of RBCs on the flow of blood in the microvasculature by directly measuring perfusion of a test microchannel network with dimensions and topology similar to the real microcirculation. The measurement of microchannel network perfusion is compared with RBC filtration -- a conventional assay of RBC deformability. In contrast to RBC filterability, network perfusion depends linearly on RBC deformability modulated by graded exposure to glutaraldehyde, showing a higher sensitivity to small changes of deformability. The direct measurement of microchannel network perfusion represents a new concept for the field of blood rheology and should prove beneficial for basic science and clinical applications.     

Investigations into beam monitors at the AEg ̄ IS experiment

Detailed diagnostic of antiproton beams at low energies is required for essentially all experiments at the Antiproton Decelerator (AD), but will be particularly important for the future Extra Low ENergy Antiproton ring (ELENA) and its keV beam lines to the different experiments. Many monitors have been successfully developed and operated at the AD, but in particular beam profile monitoring remains a challenge. A dedicated beam instrumentation and detector test stand has recently been setup at the AE \(\bar {g}\) IS experiment (Antimatter Experiment: Gravity, Interferometry, Spectroscopy). Located behind the actual experiment, it allows for parasitic use of the antiproton beam at different energies for testing and calibration. With the aim to explore and validate different candidate technologies for future low energy beam lines, as well as the downstream antihydrogen detector in AE \(\bar {g}\) IS, measurements have been carried out using Silicon strip and pixel detectors, a purpose-built secondary emission monitor and emulsions. Here, results from measurements and characterization of the different detector types with regard to their future use at the AD complex are presented.     

Predictive value of the analogy between hormone-sensitive adenylate cyclase and light-sensitive photoreceptor cyclic GMP phosphodiesterase: a specific role for a light-sensitive GTPase as a component in the activation sequence.

We report experiments which involve a light sensitive GTPase in the light dependent activation of retinal rod 3'5'-cyclic guanosine monophosphate (cGMP) phosphodiesterase (PDE). The data suggest that the light activated GTPase is intermediate between rhodopsin and PDE in the light-dependent activation sequence. We list the many striking similarities between hormone sensitive adenylate cyclase and light activated PDE in order to emphasize that the findings presented herein may have predictive value for ongoing studies of the hormone sensitive adenylate cyclase specifically regarding the role of the hormone activated GTPase in the activation sequence.