Triesterase and Promiscuous Diesterase Activities of a Di‐CoII‐Containing Organophosphate Degrading Enzyme Reaction Mechanisms

The reaction mechanism for the hydrolysis of trimethyl phosphate and of the obtained phosphodiester by the di‐Co^II derivative of organophosphate degrading enzyme from Agrobacterium radiobacter P230(OpdA), have been investigated at density functional level of theory in the framework of the cluster model approach. Both mechanisms proceed by a multistep sequence and each catalytic cycle begins with the nucleophilic attack by a metal‐bound hydroxide on the phosphorus atom of the substrate, leading to the cleavage of the phosphate‐ester bond. Four exchange‐correlation functionals were used to derive the potential energy profiles in protein environments. Although the enzyme is confirmed to work better as triesterase, as revealed by the barrier heights in the rate‐limiting steps of the catalytic processes, its promiscuous ability to hydrolyze also the product of the reaction has been confirmed. The important role played by water molecules and some residues in the outer coordination sphere has been elucidated, while the binuclear Co^II center accomplishes both structural and catalytic functions. To correctly describe the electronic configuration of the d shell of the metal ions, high‐ and low‐spin arrangement jointly with the occurrence of antiferromagnetic coupling, have been herein considered.     

Functional Binding Surface of a β‐Hairpin VEGF Receptor Targeting Peptide Determined by NMR Spectroscopy in Living Cells

In this study, the functional interaction of HPLW peptide with VEGFR2 (Vascular Endothelial Growth Factor Receptor 2) was determined by using fast ¹⁵N‐edited NMR spectroscopic experiments. To this aim, ¹⁵N uniformly labelled HPLW has been added to Porcine Aortic Endothelial Cells. The acquisition of isotope‐edited NMR spectroscopic experiments, including ¹⁵N relaxation measurements, allowed a precise characterization of the in‐cell HPLW epitope recognized by VEGFR2.     

Point approximation of a space-homogeneous transport equation

Summary We present an approximation method of a space-homogeneous transport equation which we prove is convergent. The method is very promising for numerical computation. Comparison of a numerical computation with an exact solution is given for the Master equation.     

On the Application of the Auxiliary Problem Principle

The auxiliary problem principle (APP) derives from a general theory on decomposition-coordination methods establishing a comprehensive framework for both one-level and two-level methods. In this paper, the results of the two-level methods of APP are specialized for an efficient application to some engineering problems.     

Parabolic Capacity and Soft Measures for Nonlinear Equations

We first introduce, using a functional approach, the notion of capacity related to the parabolic p-Laplace operator. Then we prove a decomposition theorem for measures (in space and time) that do not charge the sets of null capacity. We apply this result to prove existence and uniqueness of renormalized solutions for nonlinear parabolic initial boundary-value problems with such measures as right-hand side.     

Bubble dispersion patterns in bubbly-flow released from a porous plug into a gas-stirred ladle

Bubbles released from a porous plug into a gas-stirred ladle present different bubbly dispersion patterns that can be studied by CFD means. Recent modeling (Alexiadis et al.) has, in fact, led to numerical results in accord with experimental data. However, due to the high number of equations involved, it is not easy to understand the physical reasons of the transitions between these patterns. In the present paper, attention was focused on the role of fragmentation and coalescence and the pattern-transition modeled by means of intersection points between these functions.     

Transport properties of a side-chain liquid-crystalline polymer. Poly(4-acryloyloxy biphenyl)

The transport properties of a side-chain liquid-crystalline polymer forming a smectic A phase have been investigated using dichloromethane as a permeant. Samples differing in the isotropization enthaoly were analyzed. A. Correlation between this thermal parameter and sorption has been found, while the diffusion coefficient is substantially the same in all samples. The results obtained can be explained in terms of a biphasis model in which a disordered permeable phase is present within the liquid-crystalline phase, which is impermeable to the diffusant molecules.     

Nanostructured polymetallaynes of controlled length: Synthesis and characterization of oligomers and polymers from 1,1′‐bis‐(ethynyl)4,4′‐biphenyl bridging Pt(II) or Pd(II) centers

The reactivity of square planar palladium(II) and platinum(II) complexes in trans or cis configuration, namely trans or cis‐[dichlorobis(tributylphosphine)platinum(II)] and trans‐[dichlorobis(tributylphosphine)palladium(II)] with 1,1′‐bis(ethynyl) 4,4′‐biphenyl, DEBP, leading to π‐conjugated organometallic oligomeric and polymeric metallaynes, was investigated by a systematic variation of the reaction conditions. The formation of polymers and oligomers with defined chain length [? M(PBu₃)₂ (C?C? C₆H₄? C₆H₄? C?C? )]_n (n = 3–10 for the oligomers, n = 20–50 for the polymers) depends on the configuration of the precursor Pt(II) and Pd(II) complexes, the presence/absence of the catalyst CuI, and the reaction time. A series of model reactions monitored by XPS, GPC, and NMR ³¹P spectroscopy showed the route to modulate the chain growth. As expected, the nature of the transition metal (Pt or Pd) and the molecular weight of the polymers markedly influence the photophysical characteristics of the polymetallaynes, such as optical absorption and emission behavior. Polymetallaynes with nanostructured morphology could be obtained by a simple casting procedure of polymer solutions. © 2007 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 45: 3311–3329, 2007     

Principal components and spatial patterns of rain over Northern Italy, in relation to wind and geopotential fields

Summary A statistical study of precipitation over the Po Valley and the Alps during four winters, based on the application of a principal component (p.c.) method, exhibited a good correlation between the first three rotated eigenvectors of the cross-product matrix (between time series of data recorded at 70 stations) and three typical atmospheric circulation schemes over Northern Italy. The study is here continued, by relating these results to meteorological fields evaluated over a region wider than the area previously considered. Our attention mainly concentrated on the fields of time trend of geopotential height at 850 hPa over Europe, between latitude 34.5 and 51 degrees North and longitudes 0 and 21 degrees East. This was suggested by some peculiar relationships shown by the statistical distributions of geopotential height and wind direction and speed with respect to the first three p.c.’s. These relationships made us think of the possibility to use those trends as predictors of precipitation fields. Our analysis puts into evidence that three spatial patterns of geopotential, height time trend can be safely associated to the first three p.c.’s and, as a consequence, to the three precipitation modes corresponding to the spatial distributions of the eigenvectors, previously identified by us. They can therefore be considered meaningful precursors of precipitation field patterns over Northern Italy and Alpine regions.

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Riassunto Uno studio statistico della precipitazione sulla pianura padana e sulle Alpi durante quattro inverni, basato sull’applicazione del metodo delle componenti principali (c.p.), ha mostrato una buona correlazione fra i primi tre autovettori rotati della matrice dei prodotti incrociati (fra le serie temporali dei dati registrati in 70 stazioni) e tre tipici schemi di circolazione atmosferica sull’Italia del Nord. Lo studio viene qui prosequito, mettendo in relazione tali risultati con campi meteorologici valutati su una zona piú ampia di quella precedentemente considerata. La nostra attenzione si è prevalentemente concentrata sui campi di tendenza temporale dell’altezza di geopotenziale a 850 hPa sull’Europa, a latitudini comprese tra 34.5 e 51 gradi Nord e longitudini fra 0 e 21 gradi Est. Ciò è stato suggerito da alcune relazioni peculiari mostrate dalle distribuzioni statistiche di altezza di geopotenziale e di direzione ed intensità del vento rispetto alle prime tre c.p., che ci hanno fatto pensare alla possibilità di usare tali tendenze come predittori del campo di precipitazione. La nostra analisi ha messo in evidenza il fatto che tre distribuzioni spaziali di tendenza temporale del campo di altezza di geopotenziale possono essere con sicurezza associate alle prime tre c.p. e., quindi, ai tre modi di precipitazione corrispondenti alle distribuzioni spaziali degli autovettori precedentemente da noi identificati. Essi possono pertanto essere considerati significativi precursori del campo di precipitazione sull’Italia del Nord e sulle regioni alpine.

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Резюме Статистическое исследование выпадения осадков над долиной реки По и Альпами в течение четырех зим, основанное на применении метода главных компонент, обнаруживает хорошую корреляцию между первыми тремя вращающимися собственными векторами матрицы векторного произведения (между временными последовательностями данных, зарегистрированных на 70 станциях) и тремя схемами типичной атмосферной циркуляции над Северной Италией. В этой работе продолжены исследования. Полученные результаты связывайотся с метеорологическими полями, вычисленными над областью, которая шире ранее рассмотренной области. Главное внимание мы обращаем на поля временного хода для геопотенциальной высоты при 850гПа над Европой, между 34.5^щ и 51^щ северной широты и между 0^щ и 21^щ восточной долготы. Это следует из специальных соотношений, полученных с помощью статистических распределений геопотенциальной высоты и направления и скорости ветра относительно первых трех главных компонент. Эти соотношения позволяют нам использовать исследованные тенденции, как предсказатели полей вьшадения осадков. Нам анализ подтверждает, что три пространственным распределения временного хода для геопотенциальной высоты могут быть связаны с первыми тремя главными компонентами и, как следствие, с тремя моделями выцадения осадков, которые соответствуют пространственным распределениям собственных векторов, ранее идентифицированных в работе [Ш]. Следовательно, они могут рассматриватяся как предвестники для распределений полей осадков над Северной Италией и над Альпами.

     

Enantioselective synthesis of preclavulone A and its methyl ester

A highly enantioselective synthesis of the (8S,12S)-enantiomer of preclavulone A and its methyl ester is described featuring the Julia protocol for installing the (Z)-double bond in the lower chain. This procedure is suitable for the preparation of labeled preclavulone analogues for biosynthetic studies on marine clavulones.