Theoretical study of alkyl-pi and aryl-pi interactions. Reconciling theory and experiment

Quantum mechanical and quantum mechanical/molecular mechanical calculations in conjunction with continuum solvation models have been used to analyze CH-pi interactions in model systems of aryl- and alkyl-aromatic interactions, as well as in a model folding system designed to study those interactions. High level calculations reproduced accurately the interaction of CH-pi interactions in both alkyl- and aryl-based model systems. Dispersion effects dominate the interaction, but the electrostatics term is also relevant for aryl CH-pi interactions. Theoretical calculations were also used to examine the influence of CH-pi interactions in determining the conformational flexibility of folding models. Finally, a critical comparison of the results obtained from high level calculations on model systems and the experimental data derived for folding models in apolar solvents was carried out, which allowed us to reconcile the apparent discrepancy found between both data.     

A Method for Clustering and Screening of Long-dimensional Chemical Data Based on Fingerprints and Similarity Measurements

A method for the treatment of long-dimensional chemical data arrays is presented in this work with the aim of maximising classification models. The method is based on the construction of fingerprints and the subsequent generation of a similarity matrix. The similarity calculation has been modified through a scaling process to take into account different significance shown by the variables. The method was applied to spectral measurements of wines and several aspects were studied, namely: threshold considered in the construction of fingerprints and patterns, weighting factor used for scaling, normalisation method, etc. The application of both Principal Components Analysis and Soft-Independent Modelling of Class Analogies to the similarity matrices gave better classifications of the information than those obtained using original data.     

Dinuclear Cobalt(III) Complexes Showing a Co2O2 Metallacycle

The heptadentate Schiff base H₃L reacts with cobalt(II) acetate in methanol to form the discrete dinuclear complex Co₂L(OAc)₂(OMe)(H₂O)₂ ( 1 ·2H₂O). The reaction of 1 ·2H₂O with NMe₄OH·5H₂O in methanol gives rise to displacement of the acetate by methanolate groups, yielding Co₂L(OMe)₃(H₂O) ( 2 ·1H₂O). Recrystallizations of the Schiff base, 1 ·2H₂O and 2 ·H₂O in different solvents, produce single crystals of H₃L, 1 ·2.5H₂O and 2 ·2MeOH, respectively. The crystal structures of 1 ·2.5H₂O and 2 ·2MeOH show the cobalt atoms double bridged by and endogenous phenol oxygen atom and an exogenous methanolate oxygen donor, giving rise to Co₂O₂ cores with Co···Co distances of ca. 2.87 Å.     

The effect of octyl glucoside on the lamellar phase of diluted C12E4 and alcohol systems

A systematic study on phase behavior of the mixture of nonionic surfactants with alcohols at 30.0+/-0.1 degrees C was carried out. The total surfactant concentration was kept to 0.1 M varying the mole ratio of n-octyl beta-d-glucopyranoside (OG) and tetraethylene glycol monododecyl ether. Two uniphasic regions were found, the lamellar phase at low OG mole fraction and micelles at high OG mole fraction. The presence of OG favors the lamellae-micelle transition. Alkanols and benzyl alcohol were used as cosurfactants. The more hydrophobic alcohols (octanol and decanol) increase the OG content in the mixed bilayers. On the contrary, benzyl alcohol is not as favorable to the OG incorporation in the lamellar phase as in the mixed micelles. The L(3) phase has only been found as a uniphasic region with hexanol.     

Fluorimetric determination of aflatoxins by flow-injection analysis

Summary A fast and inexpensive fluorimetric method for the determination of total aflatoxins (B₁, B₂, G₁, and G₂) in food of use in screening numerous samples suspectedly containing these substances is proposed. The sensitivity of the method (determination range between 0.5 and 200.0 ng ml^–1) allows these analytes to be detected at concentrations well below legal limits; hence, separation-detection techniques such as HPLC need only be used with samples in which these compounds are found to occur. The method has been applied to maize, peanut and tapioca samples, obtaining average recoveries of 100.9 with deviations of ±5% with respect to 100% recovery.

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Fluorometrische Bestimmung von Aflatoxinen durch Fließinjektionsanalyse

     

Role of the tautomerism of 2-azaadenine and 2-azahypoxanthine in substrate recognition by xanthine oxidase

The tautomerism of 2-azaadenine and 2-hypoxanthine has been examined in the gas phase and in aqueous solution. The tautomerism in the gas phase has been studied by means of semiempirical and ab initio quantum-mechanical computations, as well as density-functional calculations. The influence of the aqueous solvent on the relative stability between tautomers has been estimated from self-consistent reaction field calculations performed with different high-level continuum models. The results provide a detailed picture of the tautomeric preference for these purine bases. The importance of tautomerism in the substrate recognition by xanthine oxidase is discussed. Finally, the rate of oxidation of 2-azaadenine and 2- hypoxanthine by xanthine oxidase is discussed in terms of the recognition model at the enzyme active site.     

Effects of ultrasonic irradiation in flow-injection systems

The effects of ultrasonic irradiation on transport and reactions in several flow-injection manifolds are described. The influences of ultrasound on the physical dispersion of the injected plug is considered. Its effects on systems involving homogeneous (catalytic and non-catalytic) and heterogeneous (liquid/liquid extraction, precipitation) reactions are critically evaluated. In general, greater sensitivity is obtained, especially for heterogeneous systems, slow reactions and low analyte concentrations. Finally, practical considerations and potential uses of the combination of ultrasonic irradiation with flow-injection analysis are discussed.     

Flow injection determination of oxalate in urine based on an inhibitory effect

Summary Two methods based on the use of the normal and stopped-flow injection modes were developed for the determination of oxalate based on its inhibitory effect on the catalytic action of Fe(III) on the 2,4-diaminophenol/hydrogen peroxide system. The linear determination ranges achieved were between 0.2 and 12.0 g ml^–1 and between 0.2 and 40.0 g ml^–1, the precision was ±5.4%, and ±3.5%, and the sampling rate was 30 and 20 samples h^–1 for the normal and stopped-flow method, respectively. Both methods have been applied to the determination of oxalate in urine with excellent results.