Amino acids and peptides. XIII. Synthetic studies on N-terminal tripeptide amide analogs of fibrin alpha-chain

N-Terminal tripeptide analogs of fibrin alpha-chain were synthesized and their inhibitory effect on fibrinogen/thrombin clotting was examined. A new water-soluble active ester, 3-pyridinium ester, was used for the synthesis. Among the synthetic peptides, H-Gly-Pro-Arg-hexamethyleneimine exhibited the highest inhibitory effect on fibrinogen-thrombin clotting.     

Inflation model with lower multipoles of the CMB suppressed

The recent observation of the cosmic microwave background anisotropy by the WMAP confirmed that the lower multipoles are considerably suppressed. From the standpoint of the cosmic variance, it is nothing but a statistical accident. Alternatively, one can attribute the deficit of fluctuation on the large scale to the cosmic history, which might be explained in the context of the inflationary physics. In this Letter, we show that it is possible to explain the suppressed lower multipoles in the hybrid new inflation model.     

Comments on the evolution of strongly degenerate neutrinos in the early universe

We reconsider the evolution of strongly degenerate neutrinos in the early universe. Our chief concern is the validity of the entropy conservation after the neutrino annihilation process has frozen out (so that the establishment of chemical equilibrium is not trivial). We argue that the entropy indeed conserves because elastic scattering keeps the neutrino and antineutrino distribution functions in the equilibrium form and the sum of their chemical potential keeps zero even after the neutrino annihilation freeze-out. We also simulate the evolution of the degenerate neutrino spectrum to support the argument. We conclude that the change in the neutrino degeneracy parameter when the relativistic degrees of freedom in the universe decreases is calculated using the entropy conservation and the lepton number conservation without worrying about at what temperature the neutrino annihilation process freezes out.     

Internal Rotation of the Methyl Group in Cations of Toluene Derivatives

The potential of the internal rotation of the methyl group was determined for o-, m-, and p-fluorotoluene cations by pulsed field ionization spectroscopy. The potential of the internal rotational motion was also surveyed for other toluene derivative cations. It was found that the barrier height generally increases by ionization. The increase in the barrier height has been discussed in connection with the reduction of the internal rotational constant B by ionization. The geometrical distortion of the methyl group during the internal rotation has been suggested.     

Does in-source decay occur independent of the ionization process in matrix-assisted laser desorption?

The influence of the acidic and basic characters of constituent amino acid residues on the peptide fragment ions produced by in-source decay under matrix assisted laser desorption/ionization (MALDI) conditions has been studied using positive- and negative-ion experiments. Whereas the in-source decay spectra of peptides containing basic Arg and/or Lys residues near the N-terminus showed so-called c_n- and a_n-series ions in positive-ion mode, a peptide that has an acidic amino acid cluster near the N-terminus and a basic residue near the C-terminus characteristically formed y_n- and z_n-series ions in the positive-ion in-source decay spectrum. These results indicated that fragment ion series produced by in-source decay depend strongly upon the acidic and basic characters of the constituent amino acid residues and the near N- and C-termini. It was suggested that in-source decay processes occur intrinsically at NH–C^α and CO–NH bonds independent of the formation of molecular-related ions, and that the cleavages at the NH–C^α and CO–NH bonds occurred independently and were dependent on the matrix used.     

Pseudo cyclic ionophores: ‘Binary-effect’ of quinolinyloxy groups at both ends of oligoethylene glycols on the conformational stabilization of their complexes with alkali metal salts

A series of noncyclic neutral ionophores has been synthesized by the reaction of oligoethylene glycol dihalides with 8-quinolinol. Complexation properties for alkali metal picrates were evaluated from solvent extraction and bulk liquid membrane transport experiments. Complexation profiles of the newly synthesized ionophores with a hexyl chain were similar to those of their homologues without the hexyl chain in the extraction experiments. Among them, the pentaethylene glycol derivatives showed the highest extraction efficiency and selectivity towards potassium ion. From the¹H NMR spectra (400 MHz), the change in chemical shifts of the aromatic protons upon the addition of alkali metal thiocyanates suggested the existence of a stabilization effect which is caused by intramolecular stacking conformations between the quinoline rings during complexation. Aryl stacking interactions depend on the size of the cations and on the chain length of the oligoethylene glycol. The relationship between transport ability towards alkali metal cations and lipophilicity of these ionophores is also discussed.     

Recursive Fermion System in Cuntz Algebra. I

Embeddings of the CAR (canonical anticommutation relations) algebra of fermions into the Cuntz algebra ?₂ (or ?_{2 d} more generally) are presented by using recursive constructions. As a typical example, an embedding of CAR onto the U(1)-invariant subalgebra of ?₂ is constructed explicitly. Generalizing this construction to the case of ?_{2 p} , an embedding of CAR onto the U(1)-invariant subalgebra of ?_{2 p} is obtained. Restricting a permutation representation of the Cuntz algebra, we obtain the Fock representation of CAR. We apply the results to embed the algebra of parafermions of order p into ?_{2 p} according to Green's ansatz. Received: 3 September 2001 / Accepted: 19 January 2002     

Projector formalism of generalized Brownian motion theory applied to dissipative and noisy systems

The projector formalism of Zwanzig-Mori type is extended to obtain generalized Fokker-Planck and generalized nonlinear Langevin equations for coarse-grained variables when the underlying microscopic dynamics is dissipative and noisy (stochastic).     

Synthesis and chiroptical properties of optically active poly(ethynylcarbazole) derivatives: Substituent effect on the helix formation

Novel chiral acetylene monomers containing carbazole, 2‐ethynyl‐9‐[(S)‐2‐methylbutoxycarbonyl]carbazole ( 1 ), 3‐ethynyl‐9‐[(S)‐2‐methylbutoxycarbonyl]carbazole ( 2 ), 2‐ethynyl‐9‐[(S)‐2‐methylbutyl]carbazole ( 3 ), and 2‐ethynyl‐9‐[(S)‐4‐methylhexyl]carbazole ( 4 ) were synthesized and polymerized with [(nbd)RhCl]₂? Et₃N. The corresponding polyacetylenes with number‐average molecular weights ranging from 68,700 to 310,000 were obtained in good yields. Poly( 1 ) exhibited a large specific rotation and an intense Cotton effect in toluene, indicating that it formed a helix with predominantly one‐handed screw sense, while the other three polymers showed no evidence for taking a helical structure. Poly( 1 ) largely decreased the CD intensity upon heating from ?10 to 60 °C. Poly( 1 ) showed a Cotton effect in film state in a manner similar to solution state. No chiral amplification was observed in the copolymerization of 1 with achiral 2‐ethynyl‐9‐tert‐butoxycarbonylcarbazole ( 5 ). © 2007 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 45: 4450–4458, 2007