1H NMR Study of Hindered Internal Rotation of Tetramethylthiuram Disulfide in Binary Dimethyl Sulfoxide‐Chloroform Mixtures

Hindered internal rotation about the C‐N single bonds joining the thiuram disulfide was studied by ¹H NMR complete line‐shaped analysis in different dimethyl sulfoxide‐chloroform (DMSO‐CDCl₃) mixtures. From the temperature dependence of methyls proton spectra, activation parameters (E_a, ΔH^≠, ΔS^≠, and ΔG^≠) were obtained. The Arrhenius plots showed a distinct isokinetic temperature at about 35 °C at which the exchange rate is more or less independent of the solvent composition. The resulting ΔH^≠ against TΔS^≠ plot showed a firmly good linear correlation, indicating the existence of an enthalpy‐entropy composition in an exchange process.     

Lowest Order Constrained Variational Calculation of Structure Properties of Protoneutron Star

We calculate the structure properties of protoneutron star such as equation of state, maximum mass, radius and temperature profile using the lowest order constrained variational method. We show that the mass and radius of protoneutron star decrease by decreasing both entropy and temperature. For the protoneutron star, it is shown that the temperature is nearly constant in the core and drops rapidly near the crust.     

Conformational changes and sequence analysis in cellulase from <Emphasis Type="Italic">Aspergillus niger</Emphasis> with cationic surfactant

The present study evaluates the binding of cetylpyridinium chloride (CPC) with cellulase in various experimental conditions using potentiometric, fluorescence spectroscopy and turbidimetric techniques. The analysis of binding curves revealed the existence of two sets of binding sets for CPC. The binding parameters were estimated and interpreted in terms of structural viewpoints of cellulase. The observation of turbidity suggests that CPC molecules individually nucleate around cellulase/CMC complex to form micelle-like structures. Fluorescence spectroscopy analysis of cellulase/CMC-surfactant system showed that these complexes could be compact to elucidate the mechanism of binding cellulase/CMC complex to CPC. The differential response of the enzyme/CMC to surfactant, indicates that the interaction on the complex surface is strongly ionic and hydrophobic(cooperative) in nature. A sequencing analysis was also conducted on β-1, 4-endoglucanase from A. niger (EglA) and others from family 12 in order to examine the nature of interaction involved in binding process and structure of carbohydrate-protein complexes. The results suggest that the conserved residues are located in a more hydrophobic microenvironment and apolar area energy is more than polar within enzyme structure.     

Development of colorimetric sensor array for discrimination of herbal medicine

Today, traditional systems of medicines (such as herbal distillates) become important resources for providing healthcare benefits. The ability to discriminate among closely similar herbal products is critical to ensure their efficacy. This article proposes a pattern-based recognition approach for the rapid discrimination of herbal distillates using a low-cost and sensitive colorimetric sensor array composed of 25 indicators. The color changes of the sensor exposed to the vapor of the herbal distillates can be monitored easily with an ordinary flatbed scanner. The digital representation of the array response was analyzed with hierarchical clustering analysis (HCA) and principal component analysis (PCA). Using new variable selection strategy, 6 indicators among the 25 employed indicators were selected as discriminant elements of the array. So, a complete discrimination (with 100% accuracy) of 46 herbal distillates was achieved. The proposed sensor represented a better resolution when analytes were placed in an oven at 85 °C for 45 min. This colorimetric sensor array demonstrates excellent potential for quality assurance/control applications of herbal distillates.     

Micellization of Pentanediyl-1,5-bis(hydroxyethylmethyl hexadecylammonium Bromide) as a Cationic Gemini Surfactant in Aqueous Solutions: Investigation Using Conductometry and Fluorescence Techniques

Pentanediyl-1,5-bis (hydroxyethylmethylhexadecylammonium bromide) was synthesized and characterized as a type of novel gemini cationic surfactant. Its solution properties were determined at various temperatures by conductivity measurements and the fluorescence quenching technique. The CMC increased in the range of 1.85 to 2.77 μmol⋅L⁻¹ as the temperature increased. The aggregation number was determined at various concentrations of NaBr solutions by the fluorescence quenching of pyrene. The thermodynamic parameters of micellization were determined using the mass law equation and the values of ΔG °, ΔH °and ΔS ° were determined for the micellization process.     

The Interaction of Polyphenol Flavonoids with β-lactoglobulin: Molecular Docking and Molecular Dynamics Simulation Studies

The interaction of quercetin, quercitrin, and rutin, as natural polyphenolic compounds, with β-lactoglobulin (BLG) using molecular docking and molecular dynamics simulation methods was examined. Molecular docking studies showed that quercetin and quercitrin were bounded to the internal cavity of protein, while rutin was bounded to the entrance of the cavity because of its large structural volume. It was found that there were one-, three-, and four-hydrogen bond interactions between BLG and quercetin, quercitrin, and rutin respectively. This showed that with an increase in the number of OH groups in the flavonoid structure, there was an increase in the number of hydrogen bond interactions. The binding constants for the binding of quercetin, quercitrin, and rutin to BLG were 1.2 × 10⁶, 1.9 × 10⁶, and 7.4 × 10⁴ M^?1 respectively. The results of molecular dynamics simulation showed that the root mean square deviation (RMSD) of non-liganded BLG and BLG–ligand complexes reached equilibration after 3500 ps. The study of the radius of gyration revealed that BLG and BLG–ligand complexes were stabilized around 2500 ps, and unlike the two other complexes, there was no conformational change for BLG–quercetin. Finally, analyzing the RMS fluctuations suggested that the structure of the ligand binding site remained approximately rigid during simulation.     

Magnetized hot neutron matter: Lowest order constrained variational calculations

We have studied the spin polarized hot neutron matter in the presence of strong magnetic field. In this work, using the lowest order constrained variational method at finite temperature and employing _AV18${\mathrm{AV}}_{18}$ nuclear potential, some thermodynamic properties of spin polarized neutron matter such as spin polarization parameter, free energy, equation of state and effective mass have been calculated. It has been shown that the strong magnetic field breaks the symmetry of the free energy, leading to a magnetized equilibrium state. We have found that the equation of state becomes stiffer by increasing both magnetic field and temperature. The magnetic field dependence of effective mass for the spin-up and spin-down neutrons has been investigated.     

Binding and fluorescence study on interaction of human serum albumin (HSA) with cetylpyridinium chloride (CPC)

Human serum albumin (HSA) is frequently used in biophysical and biochemical studies since it has a well-known primary structure and it has been associated with the binding of many different categories of small molecules. In the present study, results are presented for the binding of cetylpyridinium chloride (CPC) with HSA at various pH and 25 degrees C, as monitored using ion selective membrane electrodes and fluorescence spectroscopy of intrinsic tryptophan. The obtained binding isotherms were analyzed on basis of binding capacity concept and Hill plot in order to determine the Hill parameters of binding sets. The system behaved as a system with two sets of binding sites in all studied situations. The results represent a positive cooperative behavior and the essential role of hydrophobic interactions in both binding sets. The intrinsic binding affinity of second binding set have a similar values and trends at acidic and neutral pHs, that represents the similar unfolded structure at these pHs. CPC quenched the fluorescence arising from Trp group incorporated to HSA. A biphasic behavior was observed in quenching process that confirmed the results of binding study correspond to the existence of two binding sets. The similarity of unfolded structure in acidic and neutral pH was also confirmed by fluorescence study. The quenching of HSA fluorescence takes place with a Stern-Volmer constant of 0.643 x 10(4), 1.23 x 10(4) and 7.40 x 10(4) at pH 3.5, 6.8 and 9.5, respectively. The Stern-Volmer behavior observed at low molar ratio of [CPC]/[HSA] (about 6), that represents the occurrence of conformational changes after this molar ratio. Comparing, the K(SV) values and binding parameters indicate that the binding is dominated by hydrophobic effects and, in minor degree, by electrostatic interactions.     

Aggregation and solution behavior of 5-(1-(4-carboxybutyl) pyridinum-4-yl) 10,15,20-tris (1-methylpyridinium-4-yl) porphyrin: A resonance light scattering, fluorescence and absorption spectroscopic study

Aggregation behavior of water soluble porphyrins, 5-(1-(4-carboxybutyl) pyridinum-4-yl) 10,15,20-tris (1-methylpyridinium-4-yl) porphyrin (5-CBPyP) in the presence of various concentrations of calf thymus DNA (ct-DNA) and sodium chloride were studied in comparison with meso-tetrakis (4-N-methyl pyridinum) porphyrin (TMPyP), by optical absorption, fluorescence and resonance light scattering (RLS) spectroscopies. Both porphyrins obey Beer’s law in extended range of concentration. Optical absorption and RLS measurements demonstrated nonaggregation for both porphyrins under increasing concentration of ct-DNA and NaCl. However, in comparison, 5-CBPyP had less tendency for aggregation that may be taken as an advantage for its probable application in photodynamic therapy of cancer. The trend of changes in absorption spectra of both porphyrins in the presence of ct-DNA indicates the homogeneous intercalation binding mode. The values of (2.81 ± 0.28) × 10⁶ M^?1 and (0.95 ± 0.09) × 10⁶ M^?1 were obtained for apparent binding constant of TMPyP and 5-CBPyP from analysis of optical absorption data, respectively. This indicates the less affinity of 5-CBPyP to ct-DNA in comparison with TMPyP. The binding of both porphyrins to ct-DNA quenches fluorescence emission of Ethidium bromide (EB) that is bound to ct-DNA. The quenching process obeys linear Stern-Volmer relationship indicating the displacement of EB from its binding sites by these porphyrins. The results of this technique also represent the intercalation mode of binding for both porphyrins and higher binding affinity of TMPyP compared with 5-CBPyP.     

Curvature effect on droplet impacting onto hydrophobic and superhydrophobic spheres

Droplet impact on hydrophobic and superhydrophobic solid surfaces finds numerous applications, while the wide range of the parameters affecting its outcome necessitate a thorough study to reveal the underlying physics. Specific applications are related to the drop impact upon curved surfaces, such as micro-encapsulation in fluidized beds. Three-dimensional numerical simulations by applying Level-Set Method have been performed to investigate the water droplet impact on curved and flat hydrophobic and superhydrophobic substrates. Parameters such as the impact Weber number, the surface curvature and the equilibrium contact angle have been varied in order to assess their effects on the dynamics of the impact process. After providing a strong validation, it is found that impact on spherical surfaces generally presents a higher area of liquid to be in contact with the substrate with respect to the case of flat surfaces, when all other impact conditions are the same.