Pipette tip biosensors for bacterial double-stranded DNA using bioluminescence induced by zinc finger luciferase

The authors describe a pipette type of biosensor for detecting target genes and using a zinc finger protein fused to luciferase (ZF luciferase). The ZF protein binds to a specific DNA sequence, and the target double-stranded (ds) DNA can be detected by monitoring the enzymatic activity of ZF luciferase. A small avidin-immobilized reaction plate is placed on a plastic pipette tip (referred to as Biologi tip). The dsDNA detection procedures are carried out by using a programmable dispensing robot equipped with a photodetector. These procedures include (a) the aspiration of an analyte to capture the biotinylated target dsDNA (a product of a polymerase chain reaction) on the small reaction plate inside the pipette tip, (b) the introduction of ZF luciferase and luciferin into the pipette tip, and (c) migration of the pipette tip to the detection port to measure bioluminescence on the small reaction plate. The emission originating from luciferase activity is observed on the reaction plate containing immobilized biotin-tagged target dsDNA, whereas plates containing non-target or biotinylated single-stranded DNA only do not yield a signal. The intensity of emission increases proportionally to the concentration of dsDNA, and the detection limit of the target dsDNA is as low as 62 pM. An actual genomic DNA sample from Escherichia coli O157 was successfully detected by this automatic analyzer using the Biologi tip equipped with a reaction plate. This indicates that this system has a large potential for practical applications, including in particular point-of-care analyses in hygiene control, food safety testing, and clinical diagnosis.

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Graphical abstract A pipette-type biosensor was developed to detect target genes using a luciferase-fused zinc finger protein, where a small NeutrAvidin-immobilized reaction plate was placed on the tip, and the biotinylated target double-stranded DNA was detected by monitoring the bound luciferase activity.

     

A Programmable Signaling Molecular Recognition Nanocavity Prepared by Molecular Imprinting and Post‐Imprinting Modifications

Inspired by biosystems, a process is proposed for preparing next‐generation artificial polymer receptors with molecular recognition abilities capable of programmable site‐directed modification following construction of nanocavities to provide multi‐functionality. The proposed strategy involves strictly regulated multi‐step chemical modifications: 1) fabrication of scaffolds by molecular imprinting for use as molecular recognition fields possessing reactive sites for further modifications at pre‐determined positions, and 2) conjugation of appropriate functional groups with the reactive sites by post‐imprinting modifications to develop programmed functionalizations designed prior to polymerization, allowing independent introduction of multiple functional groups. The proposed strategy holds promise as a reliable, affordable, and versatile approach, facilitating the emergence of polymer‐based artificial antibodies bearing desirable functions that are beyond those of natural antibodies.     

Synthesis and x‐ray crystal structures of hypervalent hexacoordinate antimony compounds without halogen ligands

Hypervalent hexacoordinate antimony‐ate complex { 2‐Et₄N : Rf₃Sb⁻Et₄N⁺ (Rf: o‐C₆H₄C(CF₃)₂O‐)} was synthesized by the reaction of Rf₂SbCl with lithium 1,1,1,3,3,3‐hexafluoro‐2‐(2‐lithiophenyl)‐2‐propoxide followed by countercation exchange. Reaction of 2‐Et₄N with triethyloxonium tetrafluoroborate gave the O‐ethylated adduct ( 3 ). X‐ray crystallographic analysis of 2‐Et₄N and 3 showed distorted octahedral structures of these compounds. © 2001 John Wiley & Sons, Inc. Heteroatom Chem 12:33–37, 2001     

Hydrothermal synthesis of organic hybrid BaTiO3 nanoparticles using a supercritical continuous flow reaction system

Barium titanate (BaTiO₃: BT) nanoparticles were synthesized by the hydrothermal method in the presence of dispersants using a continuous supercritical flow reaction system. The reactants of TiO₂ sol/Ba(NO₃)₂ mixed solution and KOH solution were used as starting materials and that was heated quickly up to 400 °C under the pressure of 30 MPa for 8 ms as reaction time. The dispersant solution such as polyacrylic acid (PAA) and polyoxyethylene(20) sorbitan monooleate (Tween 80) was injected in the cooling process after the reaction. The crystal phase of the obtained particles was identified as perovskite cubic BaTiO₃ by X-ray diffractometry (XRD) and Raman spectroscopy. Raman spectra and thermogravimetric data revealed that PAA and Tween 80 fabricated hybrid BT nanoparicles. Primarily particle size of the BaTiO₃ nanoparticle was determined by means of BET surface area, as small as less than 10 nm irrespective of dispersants. In contrast, dispersed particle size in solution measured by dynamic light scattering (DLS) technique decreased from 282 nm to less than 100 nm depending on the dispersant. Aggregation of BaTiO₃ nanoparticles might be depressed in the presence of dispersants, especially PAA is the most effective among the dispersants examined.     

Synthesis and X‐ray crystal structures of hypervalent arsenic compounds bearing arsenic‐iron bonds

A hypervalent arsorane with an As–Fe bond [ 6 : Rf₂As*FeCp(CO)₂ (Rf: o‐C₆H₄C(CF₃)₂O‐)] was synthesized by the reaction of the arsoranide anion ( 4‐Et ₄N: Rf₂As*^‐Et₄N⁺) with CpFe(CO)₂I ( 5 ) in the presence of AgBF₄. Diastereomeric arsoranes { 7a and 7b : Rf₂As*Fe*Cp(CO)(PPh₃)} were prepared by irradiation of 6 with a tungsten lamp in the presence of triphenylphosphine. X‐ray crystallographic analysis of 6 and 7a showed that the apical As–O bond lengths of these compounds are slightly longer than the equatorial As–C bonds. It is concluded that an electron‐donating group at the equatorial position elongates the apical E–O bond by electron donation to the apical oxygens. © 2000 John Wiley & Sons, Inc. Heteroatom Chem 11:42–47, 2000     

Mechanism for enhancing dispersion of Co3O4 nanoparticles in Co/SiO2 Fischer–Tropsch synthesis catalyst by adding glycol to impregnating solution: a quick‐XAFS study

In situ Co K‐edge quick‐EXAFS (QEXAFS) coupled with temperature‐programmed oxidation as well as ex situ XAFS was applied to investigating the mechanism for enhancing the dispersion of Co₃O₄ nanoparticles in a calcined Co/SiO₂ Fischer–Tropsch synthesis catalyst prepared by adding triethylene glycol (TEG) to a Co(NO₃)₂.6H₂O impregnating solution. Ex situ Co K‐edge XAFS indicated that, regardless of whether the catalysts were prepared with or without using TEG, the hexaaqua Co (II) complex was formed in impregnated samples which then underwent the dehydration process to some extent during the subsequent drying step at 393 K. In situ QEXAFS and ex situ EXAFS results also indicated that small oxide clusters were formed in the TEG‐modified catalyst calcined at ～400–470 K which interacted with polymer species derived from TEG. Since the Fischer–Tropsch synthesis activity of the TEG‐modified catalyst increased with an increase in the calcination temperature in a similar temperature range [Koizumi et al. (2011), Appl. Catal. A, 395 , 138–145], it was suggested that such an interaction enables the clusters to be distributed over the support surface uniformly, resulting in enhancing their dispersion. After combustion of polymer species, Co₃O₄‐like species were formed, and agglomeration of the Co₃O₄‐like species at high calcination temperatures was suppressed by the addition of TEG to the impregnating solution. It was speculated that the addition of TEG induced the formation of some surface silicate which worked as an anchoring site for Co₃O₄ and Co⁰ nanoparticles during calcination and H₂ reduction, respectively.     

Morphology and size-controlled synthesis of silver nanoparticles in aqueous surfactant polymer solutions

We have employed a number of reducing and capping agents to obtain Ag(0) metallic nanoparticles of various sizes and morphologies. The size and morphology were tuned by selecting reducing and capping agents. Spherical particles of 15 and 43 nm diameter were obtained when 1 wt% aqueous starch solution of AgNO₃ precursor salt was reduced by d(+)-glucose and NaOH, respectively, on heating at 70 °C for 30 min. Smaller size particles obtained in the case of d(+)-glucose reduction has been attributed to the slow reduction rate by mild reducing agent d(+)-glucose compared to strong NaOH. Conducting the reduction at ambient temperature of silver salt in liquid crystalline pluronic P123 and L64 also gave spherical particles of 8 and 24 nm, respectively, without the addition of any separate reducing agent. NaOH reduction of salt in ethylene glycol (11 g)/polyvinyl pyrolidone (PVP; 0.053 g) mixture produced large self-assembled cubes of 520 nm when smaller (26–53 nm) star-shaped sharp-edged structures formed initially aggregated on heating the preparation at 190 °C for 1 h. Increasing the amount of PVP (0.5 g) in ethylene glycol (11 g) and heating at 70 °C for 30 min yielded a mixture of spherical and non-spherical (cubes, hexagons, pentagons, and triangle) particles without the addition of an extra reducing agent. Addition of 5 wt% PVP to 1 wt% aqueous starched solution resulted in the formation of a mixture of spherical and anisotropic structures when solution heated at 70 °C for 1 h. Homogeneous smaller sized (29 nm) cubes were synthesized by NaOH reduction of AgNO₃ in 12.5 wt% of water-soluble polymer poly(methyl vinyl ether) at ambient temperature in 30 min reaction time.     

Molecularly Imprinted Nanogels Acquire Stealth In Situ by Cloaking Themselves with Native Dysopsonic Proteins

Protein corona formation was regulated on the surface in vivo by molecular imprinting to enable polymeric nanogels to acquire stealth upon intravenous administration. Albumin, the most abundant protein in blood, was selected as a distinct protein component of protein corona for preparing molecularly imprinted nanogels (MIP-NGs) to form an albumin-rich protein corona. Intravital fluorescence resonance energy transfer imaging of rhodamine-labeled albumin and fluorescein-conjugated MIP-NGs showed that albumin was captured by MIP-NGs immediately after injection, forming an albumin-rich protein corona. MIP-NGs circulated in the blood longer than those of non-albumin-imprinted nanogels, with almost no retention in liver tissue. MIP-NGs also passively accumulated in tumor tissue. These data suggest that this strategy, based on regulation of the protein corona in vivo, may significantly influence the development of drug nanocarriers for cancer therapy.