Mapping of possible prion protein self-interaction domains using peptide arrays

Background  

The common event in transmissible spongiform encephalopathies (TSEs) or prion diseases is the conversion of host-encoded protease sensitive cellular prion protein (PrP^C) into strain dependent isoforms of scrapie associated protease resistant isoform (PrP^Sc) of prion protein (PrP). These processes are determined by similarities as well as strain dependent variations in the PrP structure. Selective self-interaction between PrP molecules is the most probable basis for initiation of these processes, potentially influenced by chaperone molecules, however the mechanisms behind these processes are far from understood. We previously determined that polymorphisms do not affect initial PrP^C to PrP^Sc binding but rather modulate a subsequent step in the conversion process. Determining possible sites of self-interaction could elucidate which amino acid(s) or amino acid sequences contribute to binding and further conversion into other isoforms. To this end, ovine – and bovine PrP peptide-arrays consisting of 15-mer overlapping peptides were probed with recombinant sheep PrP^C fused to maltose binding protein (MBP-PrP).     

Electrical characterization of atmospheric pressure arc plasmas

The properties of atmospheric pressure arcs are investigated by means of electric exploration of plasma column and anode region. For the electrostatic probe technique, where the level of collisionality distorts the characteristic curve, data interpretation is difficult because no comprehensive underlying theory exists for the non-homogeneous electric arcs used in industry. Results are presented from an extended study of Langmuir probes applied to short, point-plane arcs. A multi-wire apparatus, operating for arc currents in the range 50-200 A is described and ion current densities and temperature maps are shown. The reduction of the probe determined temperature with respect to emission spectroscopy values is discussed and the cooling is ascribed to ion-electron recombination within the perturbation region formed around the probe. This region is investigated by means of emission spectroscopy and the extension found agrees both with numerical estimations and fast speed camera photographs. Diamond Like Carbon (DLC) partially coated wires can address data inversion problems and the role of arc flow directionality on charge capture and preliminary observations are shown. Charge capture and anode fall structure can be investigated using a split-anode technique. A prototype of a modified apparatus is described and preliminary results on the collected current are given.Received: 20 August 2003PACS: 52. Physics of plasmas and electric discharges - 52.80.Mg Arcs; sparks; lightning; atmospheric electricity - 52.70.-m Plasma diagnostic techniques and instrumentation     

Studies on photoinduced effects in pulse-electrodeposited Ag/Hg-1212/CdSe hetero-nanostructures

Metal/superconductor/semiconductor (Ag/Hg-1212/CdSe) hetero-nanostructures have been fabricated using pulse-electrodeposition technique and are characterized by X-ray diffraction (XRD), full-width at half-maximum (FWHM) and scanning electron microscopy (SEM) studies. The junction capacitance of Ag/Hg-1212, Hg-1212/CdSe and Ag/Hg-1212/CdSe heterojunctions is measured in dark and under laser irradiation at room temperature. The nature of the junction formed and built-in-junction potentials were determined. The increase in carrier concentration across the junction due to photo-irradiation has been observed.     

Effect of laser irradiation of C-V characteristics of electrodeposited Ag/Tl-2223/CdSe hetero-nanostructures

One of the innovative technological directions for the high-temperature superconductors has been persued by fabricating the heteroepitaxial multilayer structures such as superconductor-semiconductor heterostructures. In the present investigation, metal/superconductor/semiconductor (Ag/Tl-2223/CdSe) hetero-nanostructures have successfully been fabricated using dc electrodeposition technique and were characterized by X-ray diffraction (XRD), full-width at half-maximum (FWHM) and scanning electron microscopy (SEM) studies. The measurement of junction capacitance as a function of biasing voltage was used for the estimation of junction built-in-potential (V _D) and to study the charge distribution in a heterojunction. The Mott-Schottky plots were measured for each junction in dark and under the photo-irradiation. The effect of laser irradiation on C-V characteristics of hetero-nanostructure has been studied.     

Magnetoelectricity in multiferroically composed multilayers and multiglasses

Single-crystalline magnetoelectric (ME) antiferromagnetic Cr₂O₃ exchange coupled to a ferromagnetic multilayer (Pt/Co/Pt)_n, n?1, represents a multiphase multiferroic material with sophisticated multifunctional properties. They comprise the possibility of switching the exchange bias (EB) of the ferromagnetic hysteresis loop via the linear ME effect of Cr₂O₃, and to design MERAM and logic cells operating at room temperature. Quadratic and cubic ME effects - promoted by soft-mode quantum fluctuations - are observed at lowest order in ceramic Sr_0.98Mn_0.02TiO₃ at low temperatures. Dipolar and spin glass orders occur simultaneously on the Mn²⁺ subsystem and form a multiglass by analogy with conventional multiferroics.     

Valorization of Fly Ashes and Sands Wastes from Biomass Boilers in One-Part Geopolymers

Fly ash (FA) and exhausted bed sands (sands wastes) that are generated in biomass burners for energy production are two of the wastes generated in the pulp and paper industry. The worldwide production of FA biomass is estimated at 10 million tons/year and is expected to increase. In this context, the present work aims to develop one-part alkali-activated materials with biomass FA (0–100 wt.% of the binder) and sands wastes (100 wt.% of the aggregate). FA from two different boilers, CA and CT, was characterized and the mortar’s properties, in the fresh and hardened conditions, were evaluated. Overall, the incorporation of FA decreases the compressive strength of the specimens. However, values higher than 30 MPa are reached with 50 wt.% of FA incorporation. For CA and CT, the compressive strength of mortars with 28 days of curing was 59.2 MPa (0 wt.%), 56.9 and 57.0 MPa (25 wt.%), 34.9 and 46.8 MPa (50 wt.%), 20.5 and 13.5 MPa (75 wt.%), and 9.2 and 0.2 MPa (100 wt.%), respectively. The other evaluated characteristics (density, water absorption, leached components and freeze–thaw resistance) showed no significant differences, except for the specimen with 100 wt.% of CA. Therefore, this work proved that one-part geopolymeric materials with up to 90 wt.% of pulp and paper industrial residues (FA and sand) can be produced, thus reducing the carbon footprint associated with the construction sector.     

Glycopeptide and Oligosaccharide Libraries

Despite the burgeoning interest in the various biological functions and consequent therapeutic potential of the vast number of oligosaccharides found in nature on glycoproteins and cell surfaces, the development of combinatorial carbohydrate chemistry has not progressed as rapidly as expected. The reason for this imbalance is rooted in the difficulty of oligosaccharide assembly and analysis that renders synthesis a rather cumbersome endeavor. Parallel approaches that generate series of analogous compounds rather than real libraries have therefore typically been used. Since generally low affinity is obtained for interactions between carbohydrate receptors and modified oligosaccharides designed as mimetics of natural carbohydrate ligands, glycopeptides have been explored as alternative mimics. Glycopeptides have been proven in many cases to be superior ligands with higher affinity for a receptor than the natural carbohydrate ligand. High-affinity glycopeptide ligands have been found for several types of receptors including the E-, P-, and L-selectins, toxins, glycohydrolases, bacterial adhesins, and the mannose-6-phosphate receptor. Furthermore, the assembly of glycopeptides is considerably more facile than that of oligosaccharides and the process can be adapted to combinatorial synthesis with either glycosylated amino acid building blocks or by direct glycosylation of peptide templates. The application of the split and combine approach using ladder synthesis has allowed the generation of very large numbers of compounds which could be analyzed and screened for binding of receptors on solid phase. This powerful technique can be used generally for the identification and analysis of the complex interaction between the carbohydrates and their receptors.     

Lead Zirconate Titanate Stable Stock Solution: Characterization and Applications

Lead zirconate titanate (PZT) thin films were prepared by the sol-gel process using acetic acid and 1,2-propanediol as solvents. Acetone was used as final solvent and in this way a stable stock sol (for more than 12 months) was obtained. The PZT sols prepared were reproducible and suitable for the preparation of PZT thin films. To study the sol structure evolution gas chromatography mass spectrum (GC-MS) and Fourier-transform-infrared (FT-IR) spectra were recorded and analyzed on each step of the synthesis. The rheological behavior and the stability of the stock sol were checked using a rheometer. It is observed that the addition of acetone leads to a very stable stock sol. The preliminary investigation of the electric properties of the obtained PZT thin films showed that the crystallized films deposited from a fresh prepared sol and a 12 months aged sol exhibit similar ferroelectric properties and comparable to those reported in the literature.     

Enzymatic Oxygen Microsensor Based on Bilirubin Oxidase Applied to Microbial Fuel Cells Analysis

A selective oxygen biosensor based on bilirubin oxidase (BOx) was developed. The sensor was used for determining oxygen profiles in a membraneless, single‐chamber microbial fuel cell (SCMFC), fed with raw wastewater. The linear response of the sensor was optimized by a diffusion layer of silica gel. A computer‐controlled stage was used to obtain accurate and precise measurements. Oxygen concentration in biofilms covering electrodes was measured, showing 3 mg L^?1 of O₂ in the bulk solution, decreasing to 0 mg L^?1 in the cathodic biofilm. The MFC generated power in the range of 0–0.08 mW, associated to the oxygen content.