The role of intermolecular hydrogen bond on dielectric properties in hydrogen-bonded material 5-bromo-9-hydroxyphenalenone: theoretical investigation

Dielectric properties of the hydrogen-bonded material, 5-bromo-9-hydroxyphenalenone (C(13)H(7)O(2)Br; BrHPLN), are investigated theoretically by means of electronic structure calculations and Monte Carlo simulations. The density functional calculations of BrHPLN crystals have revealed that the polarization per one molecule can be about 1.7 times larger than that of the isolated monomer. It is also found that there exists significant electron density (0.01 e bohr(-3)) in an intermolecular C-H···O region, which, together with the interatomic distances of 2.39 ? for H···O and 3.34 ? for C···O, suggests the existence of intermolecular weak hydrogen bonding that may enhance the molecular polarization. The induced polarization effects in various intermolecular configurations are evaluated with the Fragment Molecular Orbital method. In addition to the π-π stacking interactions, two types of "in plane" intermolecular weak hydrogen-bonding configurations are found to affect the molecular dipole moment most significantly. These effects are efficiently included in a Monte Carlo simulation method in terms of "dipole corrections" as functions of both the intermolecular arrangements and the intramolecular proton configurations. The application to the dielectric phase transition of a BrHPLN crystal shows that the dipole corrections almost double the transition temperature, toward better agreement with experiments, and qualitatively affect the temperature dependence of the dielectric constant. Discussions are given to support that the results will remain adequate and consistent even after explicit inclusion of the quantum tunneling effects.     

Internal tissue displacement measurement based on ultrasonic wave Doppler signal digital detection and its application to fetal movement monitoring

We have developed a fetal movement monitoring system based on small displacement measurement of internal tissues. When ultrasonic pulses are transmitted to the fetus, the reflected ultrasonic waves which have a Doppler frequency shift due to the fetal movements are detected by using an ultrasonic pulsed Doppler technique. In this paper, we propose a displacement measurement method for internal tissues which is based on the Doppler signal digital detection technique. In the method, the received ultrasonic RF signals are sampled with a sampling frequency of four times higher than the centre frequency of the ultrasonic waves; the Doppler frequency shift signals are derived using digital signal processing. From the detected signals, the internal displacements are estimated using the arc-tangent method. The basic algorithm of the detection method has already been used in the area of blood flow sensing, however, we apply the algorithm to the displacement measurement of internal tissues. The comparison between the proposed method and the conventional method is presented. The fetal movement quantitative monitoring system based on the method which has been constructed is shown.     

A new route to 1-phenylnaphthalenes by cycloaddition: a simple and selective synthesis of some naphthalene lignan lactones

2-(2-Dithianyl)benzhydrols ($\text{2}$ a-c) undergo facile cycloaddition reaction with maleic anhydride under thermal conditions to give 1-phenyl-naphthalenes ($\text{7}$ a-c) in one step. The naphthalenes ($\text{7}$ a-c) have been converted into the naphthalene lignan lactones, ($\text{9}$ a-c) and ($\text{10}$ a-c).     

Stabilization of Bicontinuous Cubic Phase and Its Two-Sided Nature Produced by Use of Siloxane Tails and Introduction of Molecular Nonsymmetry

A recent intriguing finding that a helical network arrangement forms the bicontinuous cubic phase is attracting great attention for the possibility of new routes to asymmetric synthesis by achiral molecules. However, the design of the molecular structure for the cubic phase is still unrevealed. In this work, a nonsymmetric core molecule with larger naphthalene and smaller benzene moieties at each side of the central linkage and the same disiloxanyldecyloxy terminal at both terminals is shown to be the first example of molecule forming both single-layered and double-layered core assembly modes in the Ia3d phase as a single molecule system. The molecule forms the former mode at high temperatures as a thermodynamically stable phase, similarly to the symmetric naphthalene core system, whereas, on cooling below a temperature (∼350 K), a metastable Ia3d phase forms a double-layered core state down to room temperature, which is common to the benzene core system. As another effect of the nonsymmetric core, the cubic phase is maintained at room temperature for more than 100 days with slight distortion. Infrared spectral studies and quantum chemical calculations suggested the easy transformation between the two core assembly modes. The core nonsymmetry can be a versatile fine-tuning of the core assembly mode and phase stability for the cubic phase molecules.     

Artifact Halo Reduction in Phase Contrast Microscopy Using Apodization

A new phase contrast microscopy technique for halo reduction is proposed. This technique is based on an apodization method combined with the Zernike phase contrast method. Although it has been a difficult theoretical problem, the proposed technique achieves halo reduction by considering angles of diffraction and phase differences. The technique utilizes an apodized phase plate consisting of a quarter wave phase shift ring with a 25% transmittance, and a pair of adjacent rings, which have 50% transmittance. This element is placed at the back focal plane of the objective. The result is startling, halo reduced images of phase objects providing enhanced inner details.     

Halo Reduction Technique in Phase Contrast Microscopy

A new phase contrast microscopy technique has been developed which achieves halo reduction by applying an apodization to the Zernike phase contrast method. In this technique, a new apodized phase plate is placed at the back focal plane of the objective. This plate consists of a quarter wave phase shift ring conjugated of the illuminating aperture, which has a 25#x0025; transmittance, and a pair of adjacent rings having 50#x0025; transmittance. The developed technique yields the highest resolution images without a bluish hue effect ever achieved in phase contrast microscopy.This paper was originally presented at the 2nd International Conference on Optical Design and Fabrication, ODF2000 which was held on November 15-17, 2000 at the International Conference Center, Tokyo, Waseda University, Japan.     

Neurite outgrowth-promoting active constituents of the Japanese cypress (Chamaecyparis obtusa)

In the screening of biologically active constituents from woody plants, the methanol extract of leaves of Chamaecyparis obtusa showed potent neurite outgrowth-promoting activity in neuronal PC12 cells. The ethyl acetate-soluble fraction of the methanol extract showed potent activity and was separated by means of various chromatographic methods to give the two new compounds 1 and 2, as well as 11 known lignan and sesquiterpene derivatives. The structures of the new compounds were determined to be 9-O-acetyldihydrosesamin (1) and 9-O-(11-hydroxyeudesman-4-yl)dihydrosesamin (2), respectively, in NMR studies including 2D-NMR experiments. Of the 13 compounds, the known compound hinokinin (5) and the new compound 2 showed potent neurite outgrowth-promoting activity in PC 12 cells.     

Synthesis and properties of β,β-sp3-hybridized subphthalocyanine analogues

A β,β-sp(3)-hybridized subphthalocyanine analogue, dibenzosubtriazachlorin, was synthesized, and its significantly split Q band absorptions in longer and shorter wavelength regions relative to those of subphthalocyanines were revealed. The effect of benzo-annulation to a subtriazachlorin structure on the position of the split Q bands as well as the electronic structures was also investigated.     

Parallel and antiparallel β-strands differ in amino acid composition and availability of short constituent sequences

One of the important secondary structures in proteins is the β-strand. However, due to its complexity, it is less characterized than helical structures. Using the 1641 representative three-dimensional protein structure data from the Protein Data Bank, we characterized β-strand structures based on strand length and amino acid composition, focusing on differences between parallel and antiparallel β-strands. Antiparallel strands were more frequent and slightly longer than parallel strands. Overall, the majority of β-sheets were antiparallel sheets; however, mixed sheets were reasonably abundant, and parallel sheets were relatively rare. Notably, the nonpolar, aliphatic hydrocarbon amino acids, valine, isoleucine, and leucine were observed at a high frequency in both strands but were more abundant in parallel than in antiparallel strands. The relative amino acid occurrence in β-sheets, especially in parallel strands, was highly correlated with amino acid hydrophobicity. This correlation was not observed in α-helices and 3(10)-helices. In addition, we examined the frequency of 400 amino acid doublets and 8000 amino acid triplets in β-strands based on availability, a measurement of the relative counts of the doublets and triplets. We identified some triplets that were specifically found in either parallel or antiparallel strands. We further identified "zero-count triplets" which did not occur in either parallel or antiparallel strands, despite the fact that they were probabilistically supposed to occur several times. Taken together, the present study revealed essential features of β-strand structures and the differences between parallel and antiparallel β-strands, which can potentially be applied to the secondary structure prediction and the functional design of protein sequences in the future.     

Synthesis of methyl‐substituted azobenzene–carbazole conjugated copolymers with photoinduced structural changes

Azobenzene switches its structure instantaneously by reversible trans‐to‐cis and cis‐to‐trans photoisomerization with light irradiations. Dynamic change in polymer structure is expected via introducing an azobenzene unit into the main chain. In this study, a set of methyl‐substituted azobenzene–carbazole conjugated copolymers is synthesized by the Suzuki–Miyaura coupling method. Introduction of methyl substituents to the azobenzene unit of the monomer, and polymerization in a high‐boiling solvent improve the molecular weight of the polymer. Decrease of effective conjugation length due to the twisted structure of the main chain allows progress of photoisomerization. The microstructure of the polymer was determined with grazing incidence X‐ray diffraction (GIXD) measurements using synchrotron radiation. © 2019 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2019, 57, 1756–1764