Functional Binding Surface of a β‐Hairpin VEGF Receptor Targeting Peptide Determined by NMR Spectroscopy in Living Cells

In this study, the functional interaction of HPLW peptide with VEGFR2 (Vascular Endothelial Growth Factor Receptor 2) was determined by using fast ¹⁵N‐edited NMR spectroscopic experiments. To this aim, ¹⁵N uniformly labelled HPLW has been added to Porcine Aortic Endothelial Cells. The acquisition of isotope‐edited NMR spectroscopic experiments, including ¹⁵N relaxation measurements, allowed a precise characterization of the in‐cell HPLW epitope recognized by VEGFR2.     

Cu+(H2) and Na+(H2) adducts in exchanged ZSM-5 zeolites

Cu(I) ions in Cu-ZSM-5 form Cu+(H2) complexes, stable at room temperature and sub-atmospheric H2 pressure, which do not have any homogeneous analogue except for matrix-isolated [Cu(eta2-H2)Cl]. Comparison with the unstable Na+(H2) adducts formed in the parent Na-ZSM-5 zeolite allow the conclusion that the Cu(I)/H2 bond is governed by sigma-pi overlap forces.     

Mercury-mercurous acetate indicator electrode for potentiometric titrations in anhydrous acetic acid

The authors describe a metallic mercury electrode covered with a mercurous acetate coating, its preparation, its use as an indicator electrode in anhydrous acetic acid neutralization titrations and its properties as compared with other electrodes used for the same purpose.     

Reaction of Ru3(CO)12 with but-2-yn-1,4-diol in CH3OH/KOH solution. Crystal structure of (μ-Cl)Ru3(CO)9[μ3-η-H2CCC(H)CH2]

The reaction of Ru₃(CO)₁₂ with but-2-yn-1,4-diol (HOCH₂CCCH₂OH, BUD) in CH₃OH/KOH followed by acidification with HCl leads to four products, one of which has been identified as the title complex (μ-Cl)Ru₃(CO)₉[μ₃-η⁴-H₂CCC(H)CH₂]. This is an open cluster containing a bridging Cl atom on the open side and a C₄H₅ moiety bound to all the metals. The structure of the complex has been determined by X-ray analysis.The thermal reaction of Ru₃(CO)₁₂ with BUD has been revisited for a comparison with the results in alkaline solution. The main product is the allylic derivative HRu₃(CO)₉[HCCHCCHO].     

Electrochemical Approach for the Production of Layered Double Hydroxides with a Well-Defined Co/MeIII Ratio

Layered double hydroxides (LDHs) have been widely studied for their plethora of fascinating features and applications. The potentiostatic electrodeposition of LDHs has been extensively applied in the literature as a fast and direct method to substitute classical chemical routes. However, the electrochemical approach does not usually allow for a fine control of the M^II/M^III ratio in the synthesized material. By employing a recently proposed potentiodynamic method, LDH films of controlled composition are herein prepared with good reproducibility, using different ratios of the trivalent (Fe or Al) to bivalent (Co) cations in the electrolytic solution. All the obtained materials are shown to be effective oxygen evolution reaction (OER) catalysts, and are thoroughly characterized by a multi-technique approach, including FE-SEM, XRD, Raman, AES and a wide range of electrochemical procedures.     

Navier–Stokes simulations in gappy PIV data

Velocity measurements conducted with particle image velocimetry (PIV) often exhibit regions where the flow motion cannot be evaluated. The principal reasons for this are the absence of seeding particles or limited optical access for illumination or imaging. Additional causes can be laser light reflections and unwanted out-of-focus effects. As a consequence, the velocity field measured with PIV contains regions where no velocity information is available, that is gaps. This work investigates the suitability of using the unsteady incompressible Navier–Stokes equations to obtain accurate estimates of the local transient velocity field in small gaps; the present approach applies to time-resolved two-dimensional experiments of incompressible flows. The numerics are based on a finite volume discretization with partitioned time-stepping to solve the governing equations. The measured velocity distribution at the gap boundary is taken as time-varying boundary condition, and an approximate initial condition inside the gap is obtained via low-order spatial interpolation of the velocity at the boundaries. The influence of this I.C. is seen to diminish over time, as information is convected through the gap. Due to the form of the equations, no initial or boundary conditions on the pressure are required. The approach is evaluated by a time-resolved experiment where the true solution is known a priori. The results are compared with a boundary interpolation approach. Finally, an application of the technique to an experiment with a gap of complex shape is presented.     

Single nucleotide polymorphism detection by optical DNA-based sensing coupled with whole genomic amplification

The work presented here deals with the optimization of a strategy for detection of single nucleotide polymorphisms based on surface plasmon resonance imaging. First, a sandwich-like assay was designed, and oligonucleotide sequences were computationally selected in order to study optimized conditions for the detection of the rs1045642 single nucleotide polymorphism in the gene ABCB1. Then the strategy was optimized on a surface plasmon resonance imaging biosensor using synthetic DNA sequences in order to evaluate the best conditions for the detection of a single mismatching base. Finally, the assay was tested on DNA extracted from human blood which was subsequently amplified using a whole genome amplification kit. The direct detection of the polymorphism was successfully achieved. The biochip was highly regenerable and reusable for up to 20 measurements. Furthermore, coupling these promising results with the multiarray assay, we can foresee applying this biosensor in clinical research extended to concurrent analysis of different polymorphisms.     

Layered-double-hydroxide-modified electrodes: electroanalytical applications

Two-dimensional inorganic solids, such as layered double hydroxides (LDHs), also defined as anionic clays, have open structures and unique anion-exchange properties which make them very appropriate materials for the immobilization of anions and biomolecules that often bear an overall negative charge. This review aims to describe the important aspects and new developments of electrochemical sensors and biosensors based on LDHs, evidencing the research from our own laboratory and other groups. It is intended to provide an overview of the various types of chemically modified electrodes that have been developed with these 2D layered materials, along with the significant advances made over the last several years. In particular, we report the main methods used for the deposition of LDH films on different substrates, the conductive properties of these materials, the possibility to use them in the development of membranes for potentiometric anion analysis, the early analytical applications of chemically modified electrodes based on the ability of LDHs to preconcentrate redox-active anions and finally the most recent applications exploiting their electrocatalytic properties. Another promising application field of LDHs, when they are employed as host structures for enzymes, is biosensing, which is described considering glucose as an example.

Affinity Chromatography-Based Assays for the Screening of Potential Ligands Selective for G-Quadruplex Structures

DNA G-quadruplexes (G4s) are key structures for the development of targeted anticancer therapies. In this context, ligands selectively interacting with G4s can represent valuable anticancer drugs. Aiming at speeding up the identification of G4-targeting synthetic or natural compounds, we developed an affinity chromatography-based assay, named G-quadruplex on Oligo Affinity Support (G4-OAS), by synthesizing G4-forming sequences on commercially available polystyrene OAS. Then, due to unspecific binding of several hydrophobic ligands on nude OAS, we moved to Controlled Pore Glass (CPG). We thus conceived an ad hoc functionalized, universal support on which both the on-support elongation and deprotection of the G4-forming oligonucleotides can be performed, along with the successive affinity chromatography-based assay, renamed as G-quadruplex on Controlled Pore Glass (G4-CPG) assay. Here we describe these assays and their applications to the screening of several libraries of chemically different putative G4 ligands. Finally, ongoing studies and outlook of our G4-CPG assay are reported.     

Electrochemically deposited thiophene-based polymers as protective agents for Prussian Blue thin films

A composite material based on overlapped layers of electrochemically synthesized Prussian Blue (PB) and terthiophene-derived polymer is described, aiming at enhancing the stability of the hexacyanoferrate thanks to the protective action of the polymer. Two bilayer configurations and deposition methods (for the polymer component) were tested. The morphology and electrochemical behavior in organic solvent and in aqueous solutions containing different supporting electrolytes were carried out. The best performances of electrodes modified with films of the composite material as to increased stability of PB were achieved with the potentiostatically deposited polymer covering the PB layer, in acetate buffer at pH 5.5. As for potential cycling stress, the anodic and cathodic peak currents due to PB were not decreased after 20 cycles. Conversely, PB alone displayed the anodic peak currents relevant to PB/Prussian White (PW) and PB/Berlin Green (BG) systems decreased by about 30 %. The stability to local pH increase was assessed by cyclic voltammetry after electrochemical reduction of H₂O₂. For example, the anodic peak currents were decreasing by 15 % and 5 % for the two PB redox systems, while for PB alone the same currents decreased by 35 % and 10 %. The response sensitivity to hydrogen peroxide was improved by 54 %, with respect to PB alone, as evaluated by chronoamperometry.