Temperature-induced structural transitions and vibrational properties of microclusters: ab-initio molecular dynamics studies

We present the results of ab-initio molecular dynamics studies of selected microclusters of sodium, silicon and magnesium at finite temperatures, and especially discuss those obtained around room temperature. In particular, from the analysis of the atomic trajectories we can identify in some cases the existence of different isomers and the isomerization pathways. We have also calculated vibrational spectra at low temperatures and find that they can be used as a very sensitive structural probe also in sodium clusters, where the electronic properties are quite insensitive to the geometry.     

Heavy metal biosorption by bacterial cells

Microbial biomass provides available ligand groups on which metal ions bind by different mechanisms. Biosorption of these elements from aqueous solutions represents a remediation technology suitable for the treatment of metal-contaminated effluents. The purpose of the present investigation was the assessment of the capability of Brevibacterium sp. cells to remove bivalent ions, when present alone or in pairs, from aqueous solutions, using immobilized polyacrylamide cells of the microorganism in a flow-through system. The biosorption capacity of Brevibacterium cells was studied for lead, cadmium and copper. The metal cell binding capacity followed the order Cu > Pb > Cd, based on estimated q_max. These values, expressed as mmol metal/g dry weight cells, were 0.54 for Cu, 0.36 for Pb and 0.14 for Cd. Polyacrylamide-gel immobilized cells were effective in Pb, Cu and Cd removal. Lead removal was not affected by the presence of Cd and Cu; lead instead inhibited Cd and Cu removal. The desorption of the metal, by fluxing a chelating solution, restored the metal binding capacity of the cells, thus affording the multiple use of the same biomass in the remediation treatment. Received: 31 July 1997 / Revised: 22 December 1997 / Accepted: 30 December 1997     

Star-Shaped Ruthenium Complexes as Prototypes of Molecular Gears

The design and synthesis of two families of molecular-gear prototypes is reported, with the aim of assembling them into trains of gears on a surface and ultimately achieving controlled intermolecular gearing motion. These piano-stool ruthenium complexes incorporate a hydrotris(indazolyl)borate moiety as tripodal rotation axle and a pentaarylcyclopentadienyl ligand as star-shaped cogwheel, equipped with five teeth ranging from pseudo-1D aryl groups to large planar 2D paddles. A divergent synthetic approach was followed, starting from a pentakis(p-bromophenyl)cyclopentadienyl ruthenium(II) complex as key precursor or from its iodinated counterpart, obtained by copper-catalyzed aromatic Br/I exchange. Subsequent fivefold cross-coupling reactions with various partners allowed high structural diversity to be reached and yielded molecular-gear prototypes with aryl-, carbazole-, BODIPY- and porphyrin-derived teeth of increasing size and length.     

Towards a parameter-free characterization of charge transfer via hopping: the case of tris(8-hydroxyquinolato) aluminum

By using calculations based on density functional theory, we investigate the physical factors determining the elemental charge transfer in Alq3, taken as a prototype of molecular systems in condensed phase. The effect of the environment on the hopping of the charge carrier is evaluated self-consistently in a model in which an Alq3 dimer is embedded in an ensemble of permanent and polarizable dipoles, including orientational disorder and the presence of impurities. The results indicate that the origin of the activation barrier is mainly extrinsic and that the local orientation of the dipole moments plays a major role. The influence of nonadiabaticity is also studied and found to be more important for a hole than for an electron.     

Enhancing the accuracy of virtual screening: molecular dynamics with quantum-refined force fields

Summary A methodology aimed at improving the accuracy of current docking–scoring procedures is proposed, and validated through detailed tests of its performance in predicting the activity of HIV-1 protease inhibitors. This methodology is based on molecular dynamics simulations using a force field whose effective charges are refined by means of a novel procedure that relies on quantum-mechanical calculations and preserves the internal consistency of the parameterization scheme.     

Combinational tasks performed by second-harmonic-generated holograms

Second-harmonic-generated holograms directly provide the outputs of logical gates AND and NAND operating on optical bits encoded as amplitude modulations in the object and reference wave fronts. By use of a Nd:YAG laser and a beta-barium borate crystal, we realized a real-time half-adder of two one-digit binary numbers. The feasibility of highly parallel operation is also discussed.     

Large-scale simulations of a-Si:H: the origin of midgap states revisited

Large-scale classical and quantum simulations are used to generate a-Si:H structures. The bond-resolved density of the occupied electron states discloses the nature of microscopic defects responsible for levels in the gap. Highly strained bonds give rise to band tails and midgap states. The latter originate mainly from stretched bonds, in addition to dangling bonds, and can act as hole traps. This study provides strong evidence for photoinduced degradation (Staebler-Wronski effect) driven by strain, thus supporting recent work on a-Si, and sheds light on the role of hydrogen.     

Developments in the determination of organic oxygen by pyrolysis-gas chromatography

Summary The use of 40% nickel-coated carbon is described in a method for direct determination of organic oxygen, based on instantaneous pyrolysis of the sample in a long quartz capsule, followed by gaschromatographic separation and thermal-conductivity measurement of the CO produced. A short layer of nickelised carbon is used, placed separately from the pyrolysis zone in order to avoid physical and chemical interferences. Carbon coated with 40% of nickel remains active for approximately 20 days when used in a carbon/ carbon dioxide reaction system.

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Zusammenfassung Die Verwendung von 40% Nickel enthaltender Kohle zur direkten Bestimmung von organisch gebundenem Sauerstoff wurde beschrieben. Sie beruht auf der Momentpyrolyse der Probe in einer langen Quarzkapsel und nachfolgender gaschromatographischer Trennung und Messung des entstandenen Kohlenmonoxids durch Wärmeleitfähigkeitsbestimmung. Eine kurze Schicht mit Nickel versehener Kohle wird abseits von der Pyrolysezone verwendet, um physikalische oder chemische Störungen zu vermeiden. Mit 40% Nickel versetzte Kohle bleibt etwa 20 Tage aktiv, wenn sie in einem Kohle/Kohlendioxid-System verwendet wird.