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1.
A 1Σ u + -X 1Σ g + emission in Na2 is observed following excitation ofB 1π u by various lines of an argon ion laser. The excitation energy ofB 1π u is collisionally transferred to the (2)1Σ g + which then radiatively populates theA 1Σ u + state. The Na vapour is contained in a stainless steel crossed heat pipe with Ar buffer gas and temperature around 600°C. For all laser lines except 4579 Å, the coarse features ofA-X emission are independent of the laser wavelength. However, at high resolution the finer differences between different laser line excitation are explained. Variousv′-v″ transitions in this emission are identified. Computer simulation is presented to help explain some features of this emission. 相似文献
2.
Parameterization of peptide 13C carbonyl chemical shielding anisotropy in molecular dynamics simulations. 总被引:1,自引:0,他引:1
Daniel M Jordan K Maria Mills Ioan Andricioaei Akash Bhattacharya Kim Palmo Erik R P Zuiderweg 《Chemphyschem》2007,8(9):1375-1385
NMR chemical shielding anisotropy (CSA) relaxation is an important tool in the study of dynamical processes in proteins and nucleic acids in solution. Herein, we investigate how dynamical variations in local geometry affect the chemical shielding anisotropy relaxation of the carbonyl carbon nucleus, using the following protocol: 1) Using density functional theory, the carbonyl (13)C' CSA is computed for 103 conformations of the model peptide group N-methylacetamide (NMA). 2) The variations in computed (13)C' CSA parameters are fitted against quadratic hypersurfaces containing cross terms between the variables. 3) The predictive quality of the CSA hypersurfaces is validated by comparing the predicted and de novo calculated (13)C' CSAs for 20 molecular dynamics snapshots. 4) The CSA fluctuations and their autocorrelation and cross correlation functions due to bond-length and bond-angle distortions are predicted for a chemistry Harvard molecular mechanics (CHARMM) molecular dynamics trajectory of Ca(2+)-saturated calmodulin and GB3 from the hypersurfaces, as well as for a molecular dynamics (MD) simulation of an NMA trimer using a quantum mechanically correct forcefield. We find that the fluctuations can be represented by a 0.93 scaling factor of the CSA tensor for both R(1) and R(2) relaxations for residues in helix, coil, and sheet alike. This result is important, as it establishes that (13)C' relaxation is a valid tool for measurement of interesting dynamical events in proteins. 相似文献
3.
Sunit S. Dixit A. B. Deshpande S. L. Kapur 《Journal of polymer science. Part A, Polymer chemistry》1970,8(5):1289-1297
Methyl methacrylate was polymerized at 40°C with the VCl4–AlEt3 catalyst system in n-hexane. The rate of polymerization was proportional to the catalyst and monomer concentration at Al/V ratio of 2, indicating a coordinate anionic mechanism of polymerization. NMR spectra were further used to confirm the mechanism of polymerization and stability of active sites responsible for isotacticity. 相似文献
4.
Jayaram B McConnell K Dixit SB Das A Beveridge DL 《Journal of computational chemistry》2002,23(1):1-14
Noncovalent association of proteins to specific target sites on DNA--a process central to gene expression and regulation--has thus far proven to be idiosyncratic and elusive to generalizations on the nature of the driving forces. The spate of structural information on protein--DNA complexes sets the stage for theoretical investigations on the molecular thermodynamics of binding aimed at identifying forces responsible for specific macromolecular recognition. Computation of absolute binding free energies for systems of this complexity transiting from structural information is a stupendous task. Adopting some recent progresses in treating atomic level interactions in proteins and nucleic acids including solvent and salt effects, we have put together an energy component methodology cast in a phenomenological mode and amenable to systematic improvements and developed a computational first atlas of the free energy contributors to binding in approximately 40 protein-DNA complexes representing a variety of structural motifs and functions. Illustrating vividly the compensatory nature of the free energy components contributing to the energetics of recognition for attaining optimal binding, our results highlight unambiguously the roles played by packing, electrostatics including hydrogen bonds, ion and water release (cavitation) in protein-DNA binding. Cavitation and van der Waals contributions without exception favor complexation. The electrostatics is marginally unfavorable in a consensus view. Basic residues on the protein contribute favorably to binding despite the desolvation expense. The electrostatics arising from the acidic and neutral residues proves unfavorable to binding. An enveloping mode of binding to short stretches of DNA makes for a strong unfavorable net electrostatics but a highly favorable van der Waals and cavitation contribution. Thus, noncovalent protein-DNA association is a system-specific fine balancing act of these diverse competing forces. With the advances in computational methods as applied to macromolecular recognition, the challenge now seems to be to correlate the differential (initial vs. final) energetics to substituent effects in drug design and to move from affinity to specificity. 相似文献
5.
[reaction: see text] Cycloartenol synthase cyclizes and rearranges oxidosqualene to the protosteryl cation and then specifically deprotonates from C-19. To identify mutants that deprotonate differently, randomly generated mutant cycloartenol synthases were selected in a yeast lanosterol synthase mutant. A novel His477Asn mutant was uncovered that produces 88% lanosterol and 12% parkeol. The His477Gln mutant produces 73% parkeol, 22% lanosterol, and 5% Delta(7)-lanosterol. These are the most accurate lanosterol synthase and parkeol synthase that have been generated by mutagenesis. 相似文献
6.
Sunit S. Dixit A. B. Deshpande S. L. Kapur 《Journal of polymer science. Part A, Polymer chemistry》1971,9(5):1167-1172
The polymerization of acrylonitrile with the homogeneous catalyst system of VCl4–AlEt3 in acetonitrile at 40°C has been investigated. The rate of polymerization is found to be first-order with respect to monomer and inversely proportional to the catalyst concentration. The overall activation energy for this catalyst system is 10.97 kcal/mole. The inverse proportionality of rate of polymerization with the catalyst concentration is attributed to the permanent complex formation between the catalyst complex and acrylonitrile, and a reaction scheme is proposed. 相似文献
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10.
Bhagwan S. Garg Ranjana Dixit Asha L. Singh 《Journal of Thermal Analysis and Calorimetry》1990,36(7-8):2567-2582
Three different types of iron(III) complexes, Fe(A)3, Fe(A)2(A') and Fe(A)(A')2, whereA is either piperidyldithiocarbamate or morpholyl dithiocarbamate andA' is glycine(oxine) acetylacetone have been prepared by reacting Fe(III) salt with sodium salt of piperidinedithiocarbamic acid or morpholine-dithiocarbamic acid and acetylacetone(oxine)-glycine in different ratios. The mixed ligand complexes have been characterised by elemental analysis, magnetic susceptibility measurements, infrared, electronic spectral techniques and by thermal analysis. Electronic spectral studies suggests that all the complexes possess distorted octahedral geometry. The magnetic moment of the high spin iron(III) complexes lies in the range of 5.88–6.00 and for low spin lies in the range of 3.36–4.34 B.M. TG studies show one step decomposition of complexes and formation of Fe2O3 at the end of the step. 相似文献