Necessary conditions for multistationarity in discrete dynamical systems

R. Thomas conjectured, 20 years ago, that the presence of a positive circuit in the interaction graph of a dynamical system is a necessary condition for the presence of several stable states. Recently, E. Remy et al. stated and proved the conjecture for Boolean dynamical systems. Using a similar approach, we generalize the result to discrete dynamical systems, and by focusing on the asynchronous dynamics that R. Thomas used in the course of his analysis of genetic networks, we obtain a more general variant of R. Thomas’ conjecture. In this way, we get a necessary condition for genetic networks to lead to differentiation.     

Space–time integrated least squares: a time‐marching approach

A time‐marching formulation is derived from the space–time integrated least squares (STILS) method for solving a pure hyperbolic convection equation and is numerically compared to various known methods. Copyright © 2004 John Wiley & Sons, Ltd.     

Near-infrared laser photoacoustic detection of methane: the impact of molecular relaxation

A photoacoustic sensor has been developed for trace-gas monitoring using a near-infrared semiconductor laser emitting in the 2ν₃ band of methane at 1.65 μm. The apparatus was designed for on-line process control in the manufacturing of the novel low-water-peak fibres developed for optical telecommunications. The importance of collisional relaxation processes in the generation of the photoacoustic signal is reported in the particular case of CH₄ detection in dry O₂ and O₂–N₂ mixtures. The negative influence of these effects results in a strongly reduced and phase-shifted photoacoustic signal, induced by a fast resonant coupling between the vibrational states of methane and oxygen, associated with the slow relaxation of the excited oxygen molecules. An unusual parabolic response of the sensor with respect to the methane concentration has been observed and is discussed. Finally, the beneficial effect of several species, including water vapour and helium, acting as a catalyst to hasten the relaxation of the CH₄–O₂ system, is demonstrated. PACS 42.62.Fi; 33.20.Ea; 34.50.Ez     

On the occurrence and role of SnO2, SnS and FeSn2 in coal hydroliquefaction experiments using tin-based catalysts

Mössbauer Spectroscopy, X-Ray Diffraction and Electron Microscopy were applied to the study of solid residues of coal hydroliquefaction, for which tin-based catalysts were used. In the general case hydroliquefaction runs were performed in the presence of added sulphur and of finely dispersed SnO₂ as a catalyst precursor. The only observed tin species were SnO₂ and SnS, the former with percentages higher than expected from XRD, due to its large f factor, the latter as a symmetric doublet, which suggests that any asymmetry should be ascribed to small particle sizes rather than to structure. When the S content was only that of coal and the catalyst precursor β-Sn, FeSn₂ occurred together with Sn sulfides and oxides, while no β-Sn was detected. The main catalytic role is ascribed to SnS.     

Unprecedented hour-long residence time of a cation in a left-handed G-quadruplex

Cations are critical for the folding and assembly of nucleic acids. In G-quadruplex structures, cations can bind between stacked G-tetrads and coordinate with negatively charged guanine carbonyl oxygens. They usually exchange between binding sites and with the bulk in solution with time constants ranging from sub-millisecond to seconds. Here we report the first observation of extremely long-lived K⁺ and NH₄⁺ ions, with an exchange time constant on the order of an hour, when coordinated at the center of a left-handed G-quadruplex DNA. A single-base mutation, that switched one half of the structure from left- to right-handed conformation resulting in a right–left hybrid G-quadruplex, was shown to remove this long-lived behaviour of the central cation.

An extremely long-lived cation has been detected in left-handed G-quadruplexes.     

Solid-phase synthesis using a new polyacrylic resin : Synthesis of the fragment 14–21 of the amino acid sequence of histone H4

The solid-phase synthesis of the octapeptide 1 AcGly-Ala-Lys-Arg-His-Arg-Lys-ValOMe, which represents the fragment 14-21 of the amino acid sequence of the chromosomal histone H4, as well as of the structurally related nonapeptide 2 AcGly-Ala-Lys-Leu-Arg-His-Arg-Lys-ValOMe, is described using a new polyacrylic resin containing a glycolamide ester linkage(resin-NHCO-CH₂-OCO-peptide) acting as a labile anchoring moiety between the resin and the peptide.After elongation of the polypeptide chain using classical protecting groups, i.e. t-butyloxycarbonyl for the α-NH₂ function, benzyloxycarbonyl, nitro and 2,4-dinitrophenyl groups for the side-chains of Lys, Arg and His respectively, both peptides 1 and 2 were obtained in good yields and with a high purity as shown by high-pressure liquid chromatography, by amino-acid analysis and by high-field proton NMR spectroscopy.This work demonstrates the ability of the newly introduced polyacrylic resin to act as a convenient support for solid-phase peptide synthesis.     

Synthesis and fluorescent properties of some heterobifunctional and rigidized 7-aminocoumarins

Heterobifunctional fluorescent reagents of coumarin type are synthesized. They possess, in position 7 , a rigidized or un-rigidized amino group and, in position 3 or 4 , a carboxylic function. The fluorescence characteristics of these compounds are described and compared with the 7-amino-4-methylcoumarin. The influence of the relative freedom of rotation of the amino group or the position of the acid function on the fluorescence properties are also studied.     

Coordination solids via assembly of adaptable components: systematic structural variation in alkaline earth organosulfonate networks

A family of alkaline earth organosulfonate coordination solids is reported. In contrast to more typical crystal engineering approaches, these solids are sustained by the assembly of building blocks that are coordinatively adaptable rather than rigid in their bonding preferences. The ligand, 4,5-dihydroxybenzene-1,3-disulfonate, L, progressively evolves from a 0D, 1D, 2D, to a 3D microporous network with the Group II cations Mg(2+), Ca(2+), Sr(2+), and Ba(2+), (compounds 1-4), respectively. This trend in dimensionality can be explained by considering factors such as hard-soft acid-base principles and cation radii, a rationalization which follows salient crystal engineering principles. The selective gas sorption properties of the microporous 3D network [Ba(L)(H(2)O)].H(2)O, 4, with different gaseous guests are also presented.