Dynamics of Bacteriorhodopsin in the Dark-Adapted State from Solution Nuclear Magnetic Resonance Spectroscopy

To achieve efficient proton pumping in the light-driven proton pump bacteriorhodopsin (bR), the protein must be tightly coupled to the retinal to rapidly convert retinal isomerization into protein structural rearrangements. Methyl group dynamics of bR embedded in lipid nanodiscs were determined in the dark-adapted state, and were found to be mostly well ordered at the cytosolic side. Methyl groups in the M145A mutant of bR, which displays only 10 % residual proton pumping activity, are less well ordered, suggesting a link between side-chain dynamics on the cytosolic side of the bR cavity and proton pumping activity. In addition, slow conformational exchange, attributed to low frequency motions of aromatic rings, was indirectly observed for residues on the extracellular side of the bR cavity. This may be related to reorganization of the water network. These observations provide a detailed picture of previously undescribed equilibrium dynamics on different time scales for ground-state bR.     

Time dependent Schrödinger equation for black hole evaporation: No information loss

In 1976 S. Hawking claimed that “Because part of the information about the state of the system is lost down the hole, the final situation is represented by a density matrix rather than a pure quantum state”. ¹ This was the starting point of the popular “black hole (BH) information paradox”.     

A note on Hadwiger’s conjecture for W5-free graphs with independence number two

The Hadwiger number of a graph $G$, denoted $h\left(G\right)$, is the largest integer $t$ such that $G$ contains $K_t$ as a minor. A famous conjecture due to Hadwiger in 1943 states that for every graph $G$, $h\left(G\right)\ge \chi \left(G\right)$, where $\chi \left(G\right)$ denotes the chromatic number of $G$. Let $\alpha \left(G\right)$ denote the independence number of $G$. A graph is $H$-free if it does not contain the graph $H$ as an induced subgraph. In 2003, Plummer, Stiebitz and Toft proved that $h\left(G\right)\ge \chi \left(G\right)$ for all $H$-free graphs $G$ with $\alpha \left(G\right)\le 2$, where $H$ is any graph on four vertices with $\alpha \left(H\right)\le 2$, $H=C_5$, or $H$ is a particular graph on seven vertices. In 2010, Kriesell subsequently generalized the statement to include all forbidden subgraphs $H$ on five vertices with $\alpha \left(H\right)\le 2$. In this note, we prove that $h\left(G\right)\ge \chi \left(G\right)$ for all $W_5$-free graphs $G$ with $\alpha \left(G\right)\le 2$, where $W_5$ denotes the wheel on six vertices.     

Compactness and convergence rates in the combinatorial integral approximation decomposition

The combinatorial integral approximation decomposition splits the optimization of a discrete-valued control into two steps: solving a continuous relaxation of the discrete control problem, and computing a discrete-valued approximation of the relaxed control. Different algorithms exist for the second step to construct piecewise constant discrete-valued approximants that are defined on given decompositions of the domain. It is known that the resulting discrete controls can be constructed such that they converge to a relaxed control in the \(\hbox {weak}^*\) topology of \(L^\infty \) if the grid constant of this decomposition is driven to zero. We exploit this insight to formulate a general approximation result for optimization problems, which feature discrete and distributed optimization variables, and which are governed by a compact control-to-state operator. We analyze the topology induced by the grid refinements and prove convergence rates of the control vectors for two problem classes. We use a reconstruction problem from signal processing to demonstrate both the applicability of the method outside the scope of differential equations, the predominant case in the literature, and the effectiveness of the approach.