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1.
Experimental detection of proteolytic activity in a signal peptide peptidase of Arabidopsis thaliana
Hoshi Masako Ohki Yu Ito Keisuke Tomita Taisuke Iwatsubo Takeshi Ishimaru Yoshiro Abe Keiko Asakura Tomiko 《BMC biochemistry》2013,14(1):1-8
Background
The ubiquitin ligase COP1, COnstitutively Photomorphogenic 1, functions in many biological responses in mammalian cells, but its downstream pathway remains unclear.Results
Here, we identified FIP200, a key regulator of mammalian autophagy, as a novel COP1-interacting protein by yeast two-hybrid screening. The interaction was confirmed by a GST-pulldown assay. Split-GFP analysis revealed that interaction between COP1 and FIP200 predominantly occurred in the cytoplasm and was enhanced in cells treated with UV irradiation. Different forms of FIP200 protein were expressed in cultured mammalian cells, and ectopic expression of COP1 reduced one of such forms.Conclusions
These data suggest that COP1 modulates FIP200-associated activities, which may contribute to a variety of cellular functions that COP1 is involved in. 相似文献2.
M. Kuhara 《Fresenius' Journal of Analytical Chemistry》1881,20(1):559-560
Ohne Zusammenfassung 相似文献
3.
Citrin is the hepatic mitochondrial aspartate–glutamate carrier that is encoded by the gene SLC25A13. Citrin deficiency often leads to hyperammonemia, for which the current treatment concept is different from that for primary
hyperammonemias. Metabolite level diagnosis, often referred to as chemical diagnosis, is not always successful in identifying
citrin deficiency immediately or in a timely fashion. We previously made the chemical diagnosis of citrin deficiency in ten
patients from nine families. In order to devise a more rapid and more accurate chemical diagnosis of this disorder than is
currently available, we reinvestigated the gas chromatography/mass spectrometry-based urine metabolome in these patients.
In patients aged 2 to 5 months, prominent biomarkers detected included one or more of the following metabolites: tyrosine,
p-hydroxyphenyllactate, p-hydroxyphenylpyruvate, and N-acetyltyrosine, galactose, galactitol and galactonate, glucose, glucitol, and cystathionine. These biomarkers are less prominent
in older patients, but are not increased in argininosuccinate synthetase deficiency or other hyperammonemias. α-Ketoglutaramate
(KGM), a recently recognized urinary biomarker of primary hyperammonemias associated with defects of the urea cycle, was increased
in most patients with citrin deficiency studied here in spite of normal urinary levels of glutamine (the immediate precursor
of KGM), 5-oxoproline, glutamate, aspartate, and asparagine. Other important urinary biomarkers that should be measured for
differential diagnosis of hyperammonemias, including orotate, uracil, and β-ureidopropionate, were not increased. The presence
of citrulline and citrulline-derived metabolites was noted in all cases. The present study shows that noninvasive urine metabolomics,
together with an analysis of selected metabolites or groups of metabolites, provides a more reliable and rapid chemical diagnosis
of citrin deficiency than was previously available and more readily differentiates this disorder from other hyperammonemic
syndromes. 相似文献
4.
The clinical presentation of inborn errors of pyrimidine degradation varies considerably from asymptomatic to severe neurological illness. We have reported a method to screen for and make a chemical diagnosis of beta-ureidopropionase deficiency, leading to the discovery of the first asymptomatic case of this disease. In this method, the recovery of beta-ureidopropionate and beta-ureidoisobutyrate, the key biomarkers, was very high,and the adoption of GC/MS and targeted analysis enabled us to simultaneously obtain information related and unrelated to pyrimidine metabolism. The present study reports the results of a large-scale screening of 24,000 newborns using dried urine on filter paper. Identification of a total of four asymptomatic patients among newborns suggests the high incidence (1/6000) of this disease in Japan. While these newborns were asymptomatic, two additional cases detected at the age of 5 years as well as 3 months with this method for high-risk screening had autism and West syndrome, respectively.The key biomarkers and alpha-ureidobutyrate used as an internal standard were found to give not only their di-trimethylsilyl derivatives but also tri-trimethylsilyl derivatives, upon derivatization. The mass spectra and retention times of their tri-trimethylsilyl derivatives and data handling for quantification of the markers are presented.Identification of individuals with defects in pyrimidine metabolism would realize personalized medication in cancer chemotherapy with pyrimidine analogs such as 5-fluorouracil. 相似文献
5.
Tomiko Kuhara Morimasa Ohse Yoshito Inoue Toshihiro Shinka Yoshiyuki Okano Haruo Shintaku Kazuhisa Hongou Toshio Miyawaki Wakaba Morinobu Hirosi Tamai Kenji Omura 《Rapid communications in mass spectrometry : RCM》2009,23(19):3167-3172
Nutrition and drugs are main environmental factors that affect metabolism. We performed metabolomics of urine from an 8‐year‐old patient (case 1) with epilepsy and an 11‐year‐old patient (case 2) with malignant lymphoma who was being treated with methotrexate. Both patients were receiving total parenteral nutrition (TPN). We used our diagnostic procedure consisting of urease pretreatment, partial adoption of stable isotope dilution, gas chromatography/mass spectrometry (GC/MS) measurement and target analysis for 200 analytes including organic acids and amino acids. Surprisingly, their metabolic profiles were identical to that of phenylketonuria. The neopterin level was markedly above normal in case 1, and both neopterin and biopterin were significantly above normal in case 2. Mutation analysis of genomic DNA from case 1 showed neither homozygosity nor heterozygosity for phenylalanine hydroxylase deficiency. The metabolic profiles of both cases were normal when they were not receiving TPN. TPN is presently prohibited for individuals who have inherited disorders that affect amino acid metabolism. Although the Phe content of the TPN was not the sole cause of the PKU profile, its effect, combined with other factors, e.g. specific medication or possibly underlying diseases, led to this metabolic abnormality. The present study suggests that GC/MS‐based metabolomics by target analysis could be important for assuring the safety of the treatments for patients receiving both TPN and methotrexate. Metabolomic profiling, both before and during TPN, is useful for determining the optimal nutritional formula not only for neonates, but also for young children who are known heterozygotes for metabolic disorders or whose status is unknown. Copyright © 2009 John Wiley & Sons, Ltd. 相似文献
6.
Y. Hamasaki T. Miyamoto Y. Kuhara M. Katoh K. Tada S. Takeuchi T. Nakahara 《Fiber and Integrated Optics》1981,3(4):383-389
An optical fiber sensor for measuring high electric field intensity and voltage, which utilizes the electro-optic effect of bismuth silicone oxide single crystal, has been developed successfully, and the fundamental characteristics have been evaluated. The electric field intensity distribution inside the coaxial electrodes has been measured with this sensor. The measured results are in agreement with the theoretical values. 相似文献
7.
β-O-Tosyldehydroserine 3 is prepared directly by the oxidation of the corresponding serine derivative 1 with dimethyl sulfoxide which is activated by p-toluenesulfonyl chloride. The enol tosylate 3 retains reactivities characteristic of aldehydes like those expected for the corresponding dehydroserine derivative 2. A typical reaction of 3 includes substitution of the tosyl group with nucleophiles such as primary and secondary amines, leading to other dehydroamino acids. 相似文献
8.
Ohne Zusammenfassung 相似文献
9.
Kuhara T Inoue Y Ohse M Krasnikov BF Cooper AJ 《Analytical and bioanalytical chemistry》2011,400(7):1843-1851
α-Ketoglutaramate (KGM) is the α-keto acid analogue of glutamine, which exists mostly in equilibrium with a lactam form (2-hydroxy-5-oxoproline)
under physiological conditions. KGM was identified in human urine and its concentration quantified by gas chromatography/mass
spectrometry (GC/MS). The keto acid was shown to be markedly elevated in urine obtained from patients with primary hyperammonemia
due to an inherited metabolic defect in any one of the five enzymes of the urea cycle. Increased urinary KGM was also noted
in other patients with primary hyperammonemia, including three patients with a defect resulting in lysinuric protein intolerance
and one of two patients with a defect in the ornithine transporter I. These findings indicate disturbances in nitrogen metabolism,
most probably at the level of glutamine metabolism in primary hyperammonemia diseases. Urinary KGM levels, however, were not
well correlated with secondary hyperammonemia in patients with propionic acidemia or methylmalonic acidemia, possibly as a
result, in part, of decreased glutamine levels. In conclusion, the GC/MS procedure has the required lower limit of quantification
for analysis of urinary KGM, which is markedly increased in urea cycle disorders and other primary hyperammonemic diseases. 相似文献
10.
Sato S Arai T Morikawa T Uemura K Suzuki TM Tanaka H Kajino T 《Journal of the American Chemical Society》2011,133(39):15240-15243
Photoelectrochemical reduction of CO(2) to HCOO(-) (formate) over p-type InP/Ru complex polymer hybrid photocatalyst was highly enhanced by introducing an anchoring complex into the polymer. By functionally combining the hybrid photocatalyst with TiO(2) for water oxidation, selective photoreduction of CO(2) to HCOO(-) was achieved in aqueous media, in which H(2)O was used as both an electron donor and a proton source. The so-called Z-scheme (or two-step photoexcitation) system operated with no external electrical bias. The selectivity for HCOO(-) production was >70%, and the conversion efficiency of solar energy to chemical energy was 0.03-0.04%. 相似文献