Native agarose gel electrophoresis and electroelution: A fast and cost‐effective method to separate the small and large hepatitis B capsids

Hepatitis B core antigen (HBcAg) expressed in Escherichia coli is able to self‐assemble into large and small capsids comprising 240 (triangulation number T = 4) and 180 (triangulation number T = 3) subunits, respectively. Conventionally, sucrose density gradient ultracentrifugation and SEC have been used to separate these capsids. However, good separation of the large and small particles with these methods is never achieved. In the present study, we employed a simple, fast, and cost‐effective method to separate the T = 3 and T = 4 HBcAg capsids by using native agarose gel electrophoresis followed by an electroelution method (NAGE‐EE). This is a direct, fast, and economic method for isolating the large and small HBcAg particles homogenously based on the hydrodynamic radius of the spherical particles. Dynamic light scattering analysis demonstrated that the T = 3 and T = 4 HBcAg capsids prepared using the NAGE‐EE method are monodisperse with polydispersity values of ～15% and ～13%, respectively. ELISA proved that the antigenicity of the capsids was not affected in the purification process. Overall, NAGE‐EE produced T = 3 and T = 4 capsids with a purity above 90%, and the recovery was 34% and 50%, respectively (total recovery of HBcAg is ～84%), and the operation time is 15 and 4 times lesser than that of the sucrose density gradient ultracentrifugation and SEC, respectively.     

Evolutionary snowdrift game incorporating costly punishment in structured populations

The role of punishment and the effects of a structured population in promoting cooperation are important issues. Within a recent model of snowdrift game (SG) incorporating a costly punishing strategy (P), we study the effects of a population connected through a square lattice. The punishers, who carry basically a cooperative (C) character, are willing to pay a cost α$\alpha$ so as to punish a non-cooperative (D) opponent by β$\beta$. Depending on α$\alpha$, β$\beta$, the cost-to-benefit ratio r$r$ in SG, and the initial conditions, the system evolves into different phases that could be homogeneous or inhomogeneous. The spatial structure imposes geometrical constraint on how one agent is affected by neighboring agents. Results of extensive numerical simulations, both for the steady state and the dynamics, are presented. Possible phases are identified and discussed, and isolated phases in the r–β$r\text{–}\beta$ space are identified as special local structures of strategies that are stable due to the lattice structure. In contrast to a well-mixed population where punishers are suppressed due to the cost of punishment, the altruistic punishing strategy can flourish and prevail for appropriate values of the parameters, implying an enhancement in cooperation by imposing punishments in a structured population. The system could evolve to a phase corresponding to the coexistence of C, D, and P strategies at some particular payoff parameters, and such a phase is absent in a well-mixed population. The pair approximation, a commonly used analytic approach, is extended from a two-strategy system to a three-strategy system. We show that the pair approximation can, at best, capture the numerical results only qualitatively. Due to the improper way of including spatial correlation imposed by the lattice structure, the approximation does not give the frequencies of C, D, and P accurately and fails to give the homogeneous AllD and AllP phases.     

能够突破标准量子极限的原子双数态的制备研究

所有经典的双模(两路径)干涉仪的相位测量精度都受限于1/N/(1/2)(其中N为参与干涉测量的总粒子数),这一极限被称为经典极限或标准量子极限.量子计量学最重要的目标之一是探索如何通过量子纠缠实现超越经典极限的测量精度.双数态是一种能突破经典极限的纠缠态,它由数目相等、不可区分的自旋朝上和朝下(双模)玻色粒子组成.通过光学自发参量下转换或囚禁离子内态的操控手段已实现了不到十个光子或离子的双数态.利用玻色-爱因斯坦凝聚体中原子的自旋混合过程,近年来也能产生多达几千个原子的双数态.但是这样制备的双数态的总粒子数的随机涨落过大,限制了它们的实际应用潜力.最近,我们通过调控原子凝聚体中的量子相变,实现了超过一万个原子的双数态的确定性制备.本文简要综述这一研究进展.     

Porosity characteristics and pore developments of various particle sizes palm kernel shells activated carbon (PKSAC) and its potential applications

The adsorption behaviour and the micro- and mesopore size distributions of commercial palm kernel shell activated carbons (PKSAC) and other commercial activated carbon are characterized. The results showed that PKSAC are predominantly microporous materials, where micropores account 68–79% of total porosity. On the other hand, commercial activated carbons: Norit SX Plus, Calgon 12×40, and Shirasagi “A” activated carbons contained high mesopore fraction ranging from 33 to 52%. The analysis showed that the degree of mesoporosity of PKSAC is increased steadily with the decrease of particle size. This is due to the presence of channels interconnect the smaller pores in the interior of smaller particle size PKSAC. The smaller size PKSAC particle that is highly mesoporous has preformed better on the adsorption of larger molecules such as methylene blue. On the other hand, bigger size PKSAC particle has better performance on the adsorption of smaller adsorbates such as iodine.     

A note on conservative galaxies,Skolem systems,cyclic cycle decompositions,and Heffter arrays

The conservative number of a graph $G$ is the minimum positive integer $M$, such that $G$ admits an orientation and a labeling of its edges by distinct integers in $\{1,2,\dots ,M\}$, such that at each vertex of degree at least three, the sum of the labels on the in-coming edges is equal to the sum of the labels on the out-going edges. A graph is conservative if $M=\left|E\left(G\right)\right|$. It is worth noting that determining whether certain biregular graphs are conservative is equivalent to find integer Heffter arrays.In this work we show that the conservative number of a galaxy (a disjoint union of stars) of size $M$ is $M$ for $M\equiv 0$, $3(mod4)$, and $M+1$ otherwise. Consequently, given positive integers $m_1$, $m_2$, …, $m_n$ with $m_i\ge 3$ for $1\le i\le n$, we construct a cyclic $(m_1,m_2,\dots ,m_n)$-cycle system of infinitely many circulant graphs, generalizing a result of Bryant, Gavlas and Ling (2003). In particular, it allows us to construct a cyclic $(m_1,m_2,\dots ,m_n)$-cycle system of the complete graph $K_{2M+1}$, where $M={\sum }_{i=1}^n{m}_i$. Also, we prove necessary and sufficient conditions for the existence of a cyclic $(m_1,m_2,\dots ,m_n)$-cycle system of $K_{2M+2}?F$, where $F$ is a 1-factor. Furthermore, we give a sufficient condition for a subset of ${\mathbb{Z}}_v?\left\{0\right\}$ to be sequenceable.     

Purification of His-tagged hepatitis B core antigen from unclarified bacterial homogenate using immobilized metal affinity-expanded bed adsorption chromatography

Hepatitis B core antigen (HBcAg) is used as a diagnostic reagent for the detection of hepatitis B virus infection. In this study, immobilized metal affinity-expanded bed adsorption chromatography (IMA-EBAC) was employed to purify N-terminally His-tagged HBcAg from unclarified bacterial homogenate. Streamline Chelating was used as the adsorbent and the batch adsorption experiment showed that the optimal binding pH of His-tagged HBcAg was 8.0 with a binding capacity of 1.8 mg per ml of adsorbent. The optimal elution condition for the elution of His-tagged HBcAg from the adsorbent was at pH 7 in the presence of 500 mM imidazole and 1.5 M NaCl. The IMA-EBAC has successfully recovered 56% of His-tagged HBcAg from the unclarified E. coli homogenate with a purification factor of 3.64. Enzyme-linked immunosorbent assay (ELISA) showed that the antigenicity of the recovered His-tagged HBcAg was not affected throughout the IMA-EBAC purification process and electron microscopy revealed that the protein assembled into virus-like particles (VLP).     

Improving surface quality of polyethylene terephthalate film for large area flexible electronic applications

Lamination is a method utilized to protect flexible electroluminescence device against environmental hazards, such as dust, moisture, and water vapor. The materials are typically joined together using adhesive or cohesion of the materials during the lamination process. Polyethylene terephthalate (PET) is commonly used as the substrate film where electroluminescence patterns are printed. However, PET film has a relatively low surface energy and high contact angle, which would cause relatively weak laminating strength. This paper discusses the use of atmospheric plasma as a surface treatment method to modify PET and laminating films’ interface to improve bonding and laminating quality. Experimental results revealed that atmospheric plasma process reduced the contact angle of both PET and laminating films. Functional groups favoring hydrophilicity were found on the films’ interface after the atmospheric plasma treatment. These effects consequently increased surface energies of both films and favored bonding between the films. The treated films thus had increased laminating strength by approximately six times without compromising the transparency quality.     

Direct purification of recombinant hepatitis B core antigen from two different pre-conditioned unclarified Escherichia coli feedstocks via expanded bed adsorption chromatography

Direct recovery of hepatitis B core antigen (HBcAg) from unclarified Escherichia coli homogenates via expanded bed adsorption chromatography (EBA) has been explored in this study. Streamline DEAE was selected as the anion exchanger to recover HBcAg from heat-treated and non-heat-treated unclarified feedstocks. The use of anion-exchanger for direct extraction of proteins from unclarified feedstock is not preferred due to lack of specificity of its ligand. In this study, thermal treatment of the unclarified feedstock at 60 degrees C has resulted in 1.2- and 1.8-fold increases in yield and purity of HBcAg, respectively, compared with that purified from non-heat-treated feedstock. Heating the crude feedstock has resulted in denaturation and precipitation of contaminants in the feedstock, hence reducing non-specific interactions between the cell debris and adsorbent. The selectivity of the anion-exchanger has also been increased as shown in the breakthrough curve obtained. Enzyme-linked immunosorbent assay showed that the antigenicity of the HBcAg from heat-treated unclarified feedstock is still preserved.     

The size of minimum 3‐trees

A 3‐uniform hypergraph (3‐graph) is said to be tight, if for any 3‐partition of its vertex set there is a transversal triple. We give the final steps in the proof of the conjecture that the minimum number of triples in a tight 3‐graph on n vertices is exactly . © 2006 Wiley Periodicals, Inc. J Graph Theory 54: 103–114, 2007     

Actinic Prurigo in Singaporean Chinese: A Positive Association with HLA‐DRB1*03:01

Studies have reported the association of human leukocyte antigen (HLA) genes with susceptibility to develop actinic prurigo (AP) in Caucasians, but there were no studies in Asian populations, including the Chinese. Our study was performed to determine if AP is associated with susceptibility or protective HLA alleles or haplotypes in Singaporean Chinese. All Chinese patients diagnosed with AP at National Skin Center, Singapore, from January 2002 to April 2015 were invited to participate in the study. Clinical data and phototesting results were collated, and HLA typing was performed. Among 14 patients included, 11 were male and the mean age was 49.6 (37.9–61.3) years. All patients did not have a family history of AP and none had mucosal involvement, as such these clinical features differed from Caucasian AP patients. The frequency of DRB1*03:01 in AP patients was significantly higher compared to healthy controls (43% vs 16%, P = 0.022, odds ratio (OR) 3.89). Concurrently, the frequency of HLA‐B*58:01‐DRB1*03:01 haplotype was also significantly increased (25% vs 7%, P = 0.004, OR 4.23). In conclusion, HLA‐DRB1*03:01 was associated with AP in Singaporean Chinese patients. This novel allelic association may possibly be utilized as a biological marker to aid in the diagnosis of AP in Chinese patients.