APplication of Continuous Thermodynamics to the Stability of Polymer Systems. II

A determinant criterion for the critical state in solutions and mixtures of polydisperse polymers is established within the general framework of Gibbs theory. The treatment continues an earlier paper by considering more general Gibbs free energy relations: The function replacing the x-term in the classic Flory-Huggins equation is permitted to depend on a finite number of moments of the polymer distribution(s) so as to embrace most Gibbs free energy relations of practical use. The new criterion leads to a very large reduction of computer time and of needed storage capacity compared to the traditional Gibbs determinant criterion. Some relations known from the literature are shown to be special cases of the established new criterion.     

Lipophilic phthalocyanines for their potential interest in photodynamic therapy: synthesis and photo-physical properties

Several phthalocyanines with different peripheral substituents were prepared and characterized by MALDI-TOF, ¹H NMR, UV–vis, fluorescence, and singlet oxygen quantum yields and retention time in HPLC normal phase. Zinc was used as a central metal ion to increase the photodynamic therapy efficiency. Phthalonitrile or 4-nitro phthalonitriles were used as starting materials. The influence of lipophilicity on the photophysical and photochemical properties was evaluated.     

A Facile Synthesis of Trifluoroacetaldehyde by Electroreduction Of Cf3Br In Dimethylformamide

Trifluoroacetaldehyde, isolated as CF₃CH(OCOCH₃)₂, is obtained in high yield by electroreduction of CF₃Br in DMF, using an undivided cell and a sacrificial aluminium anode.     

Electric field effects on radiation defects annealing in p-InP

We have performed annealing experiments on electron irradiated Schottky diodes on p-InP. They show a strong influence of the applied reverse bias during annealing on the recovery of the free holes concentration, as well as on the disappearance of the dominant radiation induced hole traps detected by deep level transient spectroscopy (DLTS). Compensating defects are observed to drift under the action of the electric field and accumulate at the edge of the depleted zone, while the main hole traps created by the irradiation anneal faster when empty of holes or subjected to an electric field.     

Micro–macro analysis of granular material behavior along proportional strain paths

When granular materials are subjected to proportional strain loading paths, they manifest a variety of behaviors depending on the initial void ratio of the specimen as well as the imposed dilatancy/contractancy rate. In some cases, the stress components may vanish over the duration of the test, and the specimen may progressively liquefy. To investigate this behavior, the authors have developed a kinematic approach to be deployed in two parts. First, numerical simulations are performed by means of a discrete element method. Secondly, two micromechanical models have corroborated the DEM results. The performance of these models may explain a number of microstructural mechanisms responsible for the macroscopic constitutive behavior.     

NMR analysis of a Tau phosphorylation pattern

The phosphorylation of the neuronal Tau protein modulates both its physiological role of microtubule binding and its aggregation into paired helical fragments observed in Alzheimer's diseased neurons. However, detailed knowledge of the role of phosphorylation at specific sites has been hampered by the analytical difficulties to evaluate the level of site-specific phosphate incorporation. Even with recombinant kinases, mass spectrometry and immunodetection are not evident for determining the full phosphorylation pattern in a qualitative and quantitative manner. We show here that heteronuclear NMR spectroscopy on a 15N labeled Tau sample modified by the cAMP dependent kinase allows identification of all phosphorylation sites, measures their level of phosphate integration, and yields kinetic data for the enzymatic modification of the individual sites. Filtering through the 15N label discards the necessity of any further sample purification and allows the in situ monitoring of kinase activity at selected sites. We finally demonstrate that the NMR approach can equally be used to evaluate potential kinase inhibitors in a straightforward manner.     

Co4(OH)2(C10H16O4)3 metal-organic framework: slow magnetic relaxation in the ordered phase of magnetic chains

Reported here are the synthesis and structural and topological analysis as well as a magnetic investigation of the new Co(4)(OH)(2)(C(10)H(16)O(4))(3) metal-organic framework. The structural analysis reveals a one-dimensional inorganic subnetwork based on complex chains of cobalt(II) ions in two different oxygen environments. Long alkane dioic acid molecules bridge these inorganic chains together to afford large distances and poor magnetic media between dense spin chains. The thermal dependence of the χT product provides evidence for uncompensated antiferromagnetic interactions within the cobaltous chains. In zero-field, dynamic magnetic susceptibility measurements show slow magnetic relaxation below 5.4 K while both neutron diffraction and heat capacity measurements give evidence of long-range order (LRO) below this temperature. The slow dynamics may originate from the motion of broad domain walls and is characterized by an Arrhenius law with a single energy barrier Δ(τ)/k(B) = 67(1) K for the [10-5000 Hz] frequency range. Moreover, in nonzero dc fields the ac susceptibility signal splits into a low-temperature frequency-dependent peak and a high-temperature frequency-independent peak which strongly shifts to higher temperature upon increasing the bias dc field. Heat capacity measurements have been carried out for various applied field values, and the recorded C(P)(T) data are used for the calculation of the thermal variations of both the adiabatic temperature change ΔT(ad) and magnetic entropy change ΔS(m). The deduced data show a modest magnetocaloric effect at low temperature. Its maximum moves up to higher temperature upon increasing the field variation, in relation with the field-sensibility of the intrachain magnetic correlation length.     

Bifurcation in granular materials: An attempt for a unified framework

Sudden collapse mechanisms strictly inside the Mohr–Coulomb plastic limit condition have been observed in granular materials in the laboratory as well as in the field. The purpose of this paper is to show that the theoretical framework of loss of sustainability is convenient to describe such mechanisms. In this context, the notions of both loading and response variables, which characterize the loading path applied to the specimen considered and its response path, are fundamental. Moreover, by investigating the relation between loading and response parameters, it is established that this framework also embeds the notions of loss of constitutive uniqueness and loss of controllability. Therefore, a unified approach is attempted. Finally, by highlighting the basic role played by the loading parameters, the vanishing of the second-order work is shown to be a proper criterion to detect the occurrence of a bifurcation from a quasi-static regime to a dynamic regime leading to the collapse of the material.     

Refinement of local and long-range structural order in theophylline-binding RNA using (13)C-(1)H residual dipolar couplings and restrained molecular dynamics.

13C-(1)H residual dipolar couplings (RDC) have been measured for the bases and sugars in the theophylline-binding RNA aptamer, dissolved in filamentous phage medium, and used to investigate the long-range structural and dynamic behavior of the molecule in the solution state. The orientation dependent RDC provide additional restraints to further refine the overall structure of the RNA-theophylline complex, whose long-range order was poorly defined in the NOE-based structural ensemble. Structure refinement using RDC normally assumes that molecular alignment can be characterized by a single tensor and that the molecule is essentially rigid. To address the validity of this assumption for the complex of interest, we have analyzed distinct domains of the RNA molecule separately, so that local structure and alignment tensors experienced by each region are independently determined. Alignment tensors for the stem regions of the molecule were allowed to float freely during a restrained molecular dynamics structure refinement protocol and found to converge to similar magnitudes. During the second stage of the calculation, a single alignment tensor was thus applied for the whole molecule and an average molecular conformation satisfying all experimental data was determined. Semirigid-body molecular dynamics calculations were used to reorient the refined helical regions to a relative orientation consistent with this alignment tensor, allowing determination of the global conformation of the molecule. Simultaneously, the local structure of the theophylline-binding core of the molecule was refined under the influence of this common tensor. The final ensemble has an average pairwise root mean square deviation of 1.50 +/- 0.19 A taken over all heavy atoms, compared to 3.5 +/- 1.1 A for the ensemble determined without residual dipolar coupling. This study illustrates the importance of considering both the local and long-range nature of RDC when applying these restraints to structure refinements of nucleic acids.