Working group report: Collider Physics

This is summary of the activities of the working group on collider physics in the IXth Workshop on High Energy Physics Phenomenology (WHEPP-9) held at the Institute of Physics, Bhubaneswar, India in January 2006. Some of the work subsequently done on these problems by the subgroups formed during the workshop is included in this report.     

Optimization of culture parameters for production of podophyllotoxin in suspension culture of Podophyllum hexandrum

The root explants of the germinated seedlings of Podophyllum hexandrum were grown in MS medium supplemented with indole acetic acid (IAA) (2 mg/L) and activated charcoal (0.5%), and healthy callus culture was obtained after incubation for 3 wk at 20°C. The cultivation of plant cells in shake flask was associated with problems such as clumping of cells and browning of media, which were solved by the addition of pectinase and polyvinylpyrrolidone. The effect of major media components and carbon source was studied on the growth and podophyllotoxin production in suspension culture. It was found that glucose was a better carbon source than sucrose and that NH₄ ⁺:NO₃ ⁻ ratio (total nitrogen concentration of 60 mM) and PO₄ ³⁻ did not have much effect on the growth and product formation. The relative effect of culture parameters (inoculum level, pH, IAA, glucose, NH₄ ⁺:NO₃ ⁻ ratio, and PO₄ ³⁻) on the overall growth and product response of the plant cell suspension culture was further investigated by Plackett-Burman design. This indicated that inoculum level, glucose, IAA, and pH had significant effects on growth and production of podophyllotoxin. To identify the exact optimum concentrations of these parameters on culture growth and podophyllotoxin production, central composite design experiments were formulated. The overall response equations with respect to growth and podophyllotoxin production as a function of these culture parameters were developed and used to determine the optimum concentrations of these parameters, which were pH 6.0, 1.25 mg/L of IAA, 72 g/L of glucose, and inoculum level of 8 g/L.     

Spectrophotometric determination of uranium with 5-(2′-carboxyphenyl)azo-8-quinolinol in the non-ionic micellar medium of Triton X-100

Triton X-100, a non-ionic surfactant, has been used to sensitize the reaction of 5-(2-carboxyphenyl)azo-8-quinolinol with uranium in aqueous medium at pH 5.2–6.1 to form a wine red coloured complex. The micellar sensitization results in two and a half-times enhanced molar absorptivity enabling the determination of uranium in rock samples at ppm level, stability of the complex enhanced from 4 hours to at least 72 hours. Extraction of the complex is avoided making the procedure simple, rapid and easy in operation. The molar absorptivity and Sandell's sensitivity of the complex are 1.50·10⁴l·mol^–1·cm^–1 and 15.9 ng·cm^–2, respectively, at _max=568 nm. Beer's law is obeyed over the range 0–3.3 g·ml^–1 of uranium. An amount as low as 0.19 g·ml^–1 of uranium could be determined satisfactorily within a relative standard deviation of ±1.3%. The limits of determination and practical quantitation are 0.29 and 1.80 ppm, respectively. The method was applied to the determination of uranium in soil, stream sediment and rock samples.     

CP violation at colliders

The prospects of experimental detection ofCP violation ate ⁺ e ⁻ and colliders are reviewed. After a general discussion on the quantities which can measureCP violation and on the implications of theCPT theorem, various possibilities of measuringCP violation arising outside the standard model are taken up.CP violation in leptonic processes, especially polarization effects ine ⁺ e ⁻→l ⁺ l ⁻ are discussed next.CP violation in andW ⁺ W ⁻ production and decay is also described.     

Molecular orbital calculations on the conformation of nucleic acids and their constituents

The conformational properties of the furanose ring of purine- and pyrimidine--nucleosides and-nucleotides are studied quantum-mechanically with the help of the PCILO method, using the pseudorotational concept. The computations point to the existence of two stable conformational zones centered around the C(3)-endo and C(2)-endo conformations which in the isolated furanose ring are separated by barriers of the order of 4 kcal/mole. In nucleosides one of the barriers (the one running through the O(1)-exo-C(2)-exo path) becomes very high. A detailed study is made of the relation between the phase angle of pseudorotation, P, and the torsion angle about the glycosyl bond, _CN. A very satisfactory agreement with the available experimental data is observed.

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Zusammenfassung Die Konformationseigenschaften des Furanoserings in -Nucleosiden und Nucleotiden von Purin und Pyrimidin werden nach der PCILO-Methode unter Berücksichtigung der pseudorotatorischen Betrachtungsweise studiert. Die Rechnung läßt auf die Existenz zweier stabiler Konformationszonen schließen, die in der Umgebung der C(2)-endo und der C(3)-endo Konformationen liegen, und die im isolierten Furanosering durch Energiebarrieren der Größenordnung von 4 kcal/mol voneinander getrennt sind. In Nucleosiden wird eine der Barrieren (die durch den Weg O(1)-exo-C(2)-exo gekennzeichnete) sehr hoch. Die Relation zwischen dem Phasenwinkel der Pseudorotation, P, und dem Drehwinkel um die Glycosylbindung, _CN, wird einer eingehenden Untersuchung unterworfen. Man beobachtet eine sehr zufriedenstellende Übereinstimmung mit den verfügbaren experimentellen Daten.

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Résumé Les propriétés conformationnelles du noyau furanose des -nucleosides et nucleotides des purines et pyrimidines sont étudiées par la méthode PCILO en faisant appel au concept de la pseudorotation. Les calculs indiquent l'existence de deux zones de conformations stables, centrées autour des conformations C(2)-endo et C(3)-endo, qui sont dans le sucre isolé séparées par des barrières de l'ordre de 4 kcal/mole. Dans les nucleosides, l'une de ces barrières (celle qui passe par le chemin O(1)-exo-C(2)-exo) devient très élevée. Une étude détaillée est effectuée sur la relation entre l'angle de phase de la pseudorotation P et l'angle de torsion autour de la liaison glycosylique, _CN. Un excellent accord avec les données expérimentales disponibles est observé.

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This research was supported by the R.C.P. 173 and the A.T.P. A 655-2303 of the C.N.R.S.     

Preferred conformers in n-propanol: A PCILO study

Preferred conformers around the central C-C and C-O bonds in n-propanol have been determined using the quantum-mechanical PCILO method and compared with those observed experimentally by microwave spectroscopy. The agreement between theory and experiment is excellent, thus minimizing time consuming searches for microwave transitions corresponding to the preferred conformers.     

Molecular orbital studies on the structure of nucleoside analogs. IV. Conformation of 3-deazapurine nucleosides

Conformational properties of 3-deazapurine nucleosides (namely, 3-deazaadenosine and 3-deazaguanosine) have been investigated by the PCILO method. Both C(2′)-endo and C(3′)-endo sugar puckers have been considered and the results indicate that the conformational preferences of these nucleoside analogs are quite different from those of their parent nucleosides adenosine and guanosine, respectively. This result has been correlated in terms of the biological inactivity of these nucleoside analogs.     

Conformation of nucleoside antibiotics

Minor modifications or substitutions in the sugar or in the base part of pyrimidine and purine nucleosides have a profound effect on their biological activity. These modified nucleosides usually become antiviral, antibacterial, or cancerostatic agents and they are collectively called nucleoside antibiotics. The conformational properties of some of these nucleoside antibiotics have been studied by the PCILO method. The results obtained from such study indicate that the conformational preferences of these nucleoside antibiotics are very similar to those of their parent nucleosides and especially so in the situations that occur in aqueous solutions. The important biological significance of these results is that these nucleoside antibiotics can easily get incorporated into growing chains of DNA and RNA by mimicking their parent nucleosides and can interfere with the protein synthesis of RNA or DNA synthesis.     

Structural,electronic, and mechanical properties of cubic TiO_2:A first-principles study

We present an analysis of structural, electronic, and mechanical properties of cubic titanium dioxide(TiO_2) using an all electron orthogonalzed linear combinations of atomic orbitals(OLCAO) basis set under the framework of density functional theory(DFT). The structural property, especially the lattice constant a, and the electronic properties such as the band diagram and density of states(DOS) are studied and analyzed. The mechanical properties such as bulk moduli, shear moduli, Young's Moduli, and Poison's ratio are also investigated thoroughly. The calculations are carried out on shear moduli and anisotropy factor for cubic TiO_2. The Vickers hardness is also tested for fluorite and pyrite cubic-structured TiO_2. Furthermore, the results are compared with the previous theoretical and experimental results. It is found that DFTbased simulation produces results which are approximation to experimental results, whereas the calculated elastic constants are better than the previous theoretical and experimental values.