Identification of phytocompounds from Houttuynia cordata Thunb. as potential inhibitors for SARS-CoV-2 replication proteins through GC–MS/LC–MS characterization,molecular docking and molecular dynamics simulation

The COVID-19 pandemic caused by Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) is a massive viral disease outbreak of international concerns. The present study is mainly intended to identify the bioactive phytocompounds from traditional antiviral herb Houttuynia cordata Thunb. as potential inhibitors for three main replication proteins of SARS-CoV-2, namely Main protease (Mpro), Papain-Like protease (PLpro) and ADP ribose phosphatase (ADRP) which control the replication process. A total of 177 phytocompounds were characterized from H. cordata using GC–MS/LC–MS and they were docked against three SARS-CoV-2 proteins (receptors), namely Mpro, PLpro and ADRP using Epic, LigPrep and Glide module of Schrödinger suite 2020-3. During docking studies, phytocompounds (ligand) 6-Hydroxyondansetron (A104) have demonstrated strong binding affinity toward receptors Mpro (PDB ID 6LU7) and PLpro (PDB ID 7JRN) with G-score of???7.274 and???5.672, respectively, while Quercitrin (A166) also showed strong binding affinity toward ADRP (PDB ID 6W02) with G-score -6.788. Molecular Dynamics Simulation (MDS) performed using Desmond module of Schrödinger suite 2020–3 has demonstrated better stability in the ligand–receptor complexes A104-6LU7 and A166-6W02 within 100 ns than the A104-7JRN complex. The ADME-Tox study performed using SwissADMEserver for pharmacokinetics of the selected phytocompounds 6-Hydroxyondansetron (A104) and Quercitrin (A166) demonstrated that 6-Hydroxyondansetron passes all the required drug discovery rules which can potentially inhibit Mpro and PLpro of SARS-CoV-2 without causing toxicity while Quercitrin demonstrated less drug-like properties but also demonstrated as potential inhibitor for ADRP. Present findings confer opportunities for 6-Hydroxyondansetron and Quercitrin to be developed as new therapeutic drug against COVID-19.

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Instability of quark matter core in a compact newborn neutron star with moderately strong magnetic field

It is explicitly shown that if phase transition occurs at the core of a newborn neutron star with moderately strong magnetic field strength, which populates only the electron’s Landau levels, then in the β -equilibrium condition, the quark core is energetically much more unstable than the neutron matter of identical physical condition.     

Relativistic version of Landau theory of Fermi liquid in presence of strong quantizing magnetic field—an exact formalism

An exact formalism for the relativistic version of Landau theory of Fermi liquid in presence of strong quantizing magnetic field is developed. Both direct and exchange type interactions with scalar and vector coupling cases are considered.     

A Second-Order Theory for Electron Plasma Solitary Waves in a Cylindrical Waveguide

To describe the long time asymptotic behaviour of weakly nonlinear plasma waves propagating in a strongly magnetized plasmafilled cylindrical waveguide the usual KDV equation which is first order in wave amplitude is extended to second order including the effects of finite temperature, mobile ions and giving a proper treatment to the radial co-ordinate for all possible modes of propagation. The second-order effects on the first-order solitary wave profile, phase speed and first order correction to the wavelength are all determined and discussed.     

Intermittency in the Slow Particle Emission During Hadron–Nucleus Interactions

The study of the angular distribution of slow particles during high energy hadron-nucleus interaction indicates that emission of slow particles takes place from a thermally non-equilibrated system. This evidence has come out from the presence of intermittency - a phenomenon that reveals a fractal structure and represents a self-similarity in the particle production process. Hence, this study highlights inadequacy of cascade-evaporation model and advocates the need of its refinement.     

Correction: Phytol-based novel adjuvants in vaccine formulation: 1. assessment of safety and efficacy during stimulation of humoral and cell-mediated immune responses

This is a correction article.     

Energy crisis or a new soliton in the noncommutative CP(1) model?

The non-commutative (NC) CP(1) model is studied from field theory perspective. Our formalism and definition of the NC CP(1) model differs crucially from the existing one [Phys. Lett. B 498 (2001) 277, hep-th/0203125, hep-th/0303090].

Due to the U(1) gauge invariance, the Seiberg–Witten map is used to convert the NC action to an action in terms of ordinary spacetime degrees of freedom and the subsequent theory is studied. The NC effects appear as (NC parameter) θ-dependent interaction terms. The expressions for static energy, obtained from both the symmetric and canonical forms of the energy momentum tensor, are identical, when only spatial noncommutativity is present. Bogomolny analysis reveals a lower bound in the energy in an unambiguous way, suggesting the presence of a new soliton. However, the BPS equations saturating the bound are not compatible to the full variational equation of motion. This indicates that the definitions of the energy momentum tensor for this particular NC theory (the NC theory is otherwise consistent and well defined), are inadequate, thus leading to the “energy crisis”.

A collective coordinate analysis corroborates the above observations. It also shows that the above mentioned mismatch between the BPS equations and the variational equation of motion is small.     

Buckling of laminated plates - A simple finite element based on higher-order theory

A four-noded rectangular element with seven degrees of freedom at each node is developed for buckling analysis of laminated plate structures having any number of layers with a constant thickness of individual layers. The displacement model is so chosen that it can explain adequately the parabolic distribution of transverse shear stresses and the non-linearity of in-plane displacements across the thickness. A geometrical stiffness matrix is developed using in-plane stresses. A wide range of plates from thick to thin are examined under uniaxial loading conditions. The results are compared with the existing analytical and numerical solutions. The present formulations confirm its applicability for buckling analysis of a wide range of plates.     

Effect of the three-body force on triton asymptotic normalization constants by the hyperspherical harmonics expansion method

We investigate the change in the calculated value of asymptotic normalization constant (ANC) by the hyperspherical harmonics expansion method with the inclusion of three nucleon force (3BF) in addition to two nucleon force. We see that ANC does not change very much with the inclusion of 3BF indicating that the 3BF does not alter the asymptotic behaviours of HHE wavefunction significantly.