Design and synthesis of novel fluoropeptidomimetics as potential mimics of the transition state during peptide hydrolysis

alpha-Fluoroamino acids were targeted in our ongoing efforts to design novel fluoropeptidomimetics (1) as potential protease inhibitors. alpha-Fluoroglycine derivative (2) and alpha-fluoro-beta-aminoethanethiol derivatives (3-9) were synthesized for the first time en route to obtain the peptidomimetic moiety 1. The stability of 2-9 was investigated under organic as well as aqueous conditions. The stability of 3-9 under acidic and basic conditions, the effect of substitution at C-2 position, and potential biological activities are discussed.     

Alkynylcyclohexadienyl tricarbonyliron complexes: A new directing effect for organoiron-mediated synthesis

The first example of an alkyne-substituted tricarbonyl(η⁵-cyclohexadienyl)iron(1+) complex has been prepared and the ω directing effect of the phenylethynyl substituent has been demonstrated in nucleophile addition reactions. Addition of NC⁻ also occurs at the a position to form an unusual η¹, η³-structure.     

Hydroxylation and epoxidation studies of some 3,4-dialkylcyclopentenes

The hydroxylation and the epoxidation of the cis and trans isomers of 3,4-dimethylcyclopentene and 4-t-butyl-3-methylcyclopentene have been studied. The stereoselectivity was studied as a function of the basic conformation of the individual cyclopentenes; the conformations were determined by ¹H NMR spectroscopy.     

Assessing calves as carriers of Cryptosporidium and Giardia with zoonotic potential on dairy and beef farms within a water catchment area by mutation scanning

In the present study, we undertook a molecular epidemiological survey of Cryptosporidium and Giardia in calves on three dairy and two beef farms within an open drinking water catchment area (Melbourne, Australia). Faecal samples (n = 474) were collected from calves at two time points (5 months apart) and tested using a PCR‐based mutation scanning‐targeted sequencing phylogenetic approach, employing regions within the genes of small subunit (SSU) of ribosomal RNA (designated partial SSU), 60 kDa glycoprotein (pgp60) and triose phosphate isomerase (ptpi) as genetic markers. Using partial SSU, the C. bovis, C. parvum, C. ryanae and a new genotype of Cryptosporidium were characterised from totals of 74 (15.6%), 35 (7.3%), 37 (7.8%) and 9 (1.9%) samples, respectively. Using pgp60, C. parvum genotype IIa subgenotype A18G3R1 was detected in 29 samples. Using ptpi, G. duodenalis assemblages A and E were detected in totals of 10 (2.1%) and 130 (27.4%) samples, respectively. The present study showed that a considerable proportion of dairy and beef calves in this open water catchment region excreted Cryptosporidium (i.e. subgenotype IIaA18G3R1) and Giardia (e.g. assemblage A) that are consistent with those infecting humans, inferring that they are of zoonotic importance. Future work should focus on exploring, in a temporal and spatial way, whether these parasites occur in the environment and water of the catchment reservoir.     

Importance of halide involving interactions at Hoogsteen sites in supramolecular architectures of some coordination metal complexes of N<Superscript>6</Superscript>-benzyl/furfuryl adenine

Background

Most of the benzyladenine and furfuryladenine derivatives inhibit tumor/cancer cell growth; their toxicity is lesser than the compounds used for the treatment of cancer now-a-days. Many cytokinin derivatives are tested for anticancer activity.

Results

A series of transition metal complexes containing N⁶-benzyl/furfuryl aminopurines of formula [Mn(FAH)₂(H₂O)(Cl₃)]₂.Cl₂(1), [Co(FAH)2(H₂O)(Cl₃)]₂.Cl₂(2), [Co(FAH)₂(Cl₄)]_{2 .}[Co(FAH)₂(H₃O)(Cl₃)].Cl₂(3), [Ni(FAH)₂(H₂O)(Cl₃)]₂.Cl_2. (H2O) (4), [Zn(BAH)Br₃] (5) and [Cd₂(BAH)₂(μ-Br)₄Br₂]_n(6) (where BAH and FAH benzyladeninium and furfuryladeninium cations respectively) have been synthesized and characterized. Crystal structures of (1-4) have similar distorted octahedral coordination geometry, while (5) and (6) have distorted tetrahedral geometry and octahedral geometries respectively. In (1-4) two halide ions and two cytokinin cations (BAH⁺/FAH⁺) are laterally coordinated to the metal ion. A water molecule and a halide ion are axially coordinated. But the coordination sphere of (5) consists of N7 coordinated benzyladeninium ion and three halide ions. The complex (6) is a coordination polymer bridged by bromide anions. A common notable feature in (1-4) is the presence of one or more lattice chloride anions. They help in a chain formation by N-H…Cl halide involving hydrogen bonding interactions in between the Hoogsteen site hydrogen.

Conclusions

The observed crystal structures emphasize the role of the halide ions in developing the supramolecular architectures by halide involving hydrogen bonding interactions. Also most of the reported cobalt cytokinin complexes possess tetrahedral coordination geometry, but some cobalt complexes have distorted octahedral coordination geometry, which are discussed and compared.

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Graphical Abstract Supramolecular architectures of some coordination metal complexes of N6-benzyl/furfuryl adenine.

     

Superlight small bipolarons in the presence of a strong Coulomb repulsion

We study a lattice bipolaron on a staggered triangular ladder and triangular and hexagonal lattices with both long-range electron-phonon interaction and strong Coulomb repulsion using a novel continuous-time quantum Monte Carlo algorithm to solve the two-particle Coulomb-Fr?hlich model. The algorithm is preceded by an exact integration over phonon degrees of freedom, and as such is extremely efficient. The bipolaron effective mass and radius are computed. Bipolarons on lattices constructed from triangular plaquettes have a novel crablike motion, and are small but very light over a wide range of parameters. We discuss the conditions under which such particles may form a Bose-Einstein condensate with high transition temperature, proposing a route to room temperature superconductivity.     

Self-injection length in La0.7Ca0.3MnO3-YBa2Cu3O7-δ ferromagnet-superconductor multilayer thin films

We have carried out extensive studies on the self-injection problem in barrierless heterojunctions between La_0.7Ca_0.3MnO₃ (LCMO) and YBa₂Cu₃O_7-δ (YBCO) thin films. The heterojunctions were formed in situ by sequentially growing LCMO and YBCO films on 〈100〉 LaAlO₃ (LAO) substrate using a pulsed laser deposition (PLD) system. YBCO micro-bridges with 64 μm width were patterned both on the LAO (control) and LCMO side of the substrate. Critical current, I _c, was measured at 77 K on both the control side as well as the LCMO side for different YBCO film thickness. It was observed that while the control side showed a J _c of ∼ 2 × 10⁶ A/cm², the LCMO side showed about half the value for the same thickness (1800 ?). The difference in J _c indicates that a certain thickness of YBCO has become ‘effectively’ normal due to self-injection. From the measurement of J _c at two different thicknesses (1800 ? and 1500 ?) of YBCO films both on the LAO as well as the LCMO side, the value of self-injection length (at 77 K) was estimated to be ∼ 900 ?. To the authors’ best knowledge, this is the first time that self-injection length has been quantified. A control experiment carried out with LaNiO₃ deposited by PLD on YBCO did not show any evidence of self-injection.     

Mutation Classes of Skew-Symmetric 3 × 3-Matrices

In this article, we establish a bijection between the set of mutation classes of mutation-cyclic skew-symmetric integral 3 × 3-matrices and the set of triples of integers (a, b, c) such that 2 ≤ a ≤ b ≤ c and ab ≥ c. We also give an algorithm allowing to verify whether a matrix is mutation-cyclic or not. We prove that given a, b, the two cases depend on whether c is large enough or not.     

The bitwisted Cartesian model for the free loop fibration

Using the notion of truncating twisting function from a simplicial set to a cubical set a special, bitwisted, Cartesian product of these sets is defined. For the universal truncating twisting function, the (co)chain complex of the corresponding bitwisted Cartesian product agrees with the standard Cartier (Hochschild) chain complex of the simplicial (co)chains. The modelling polytopes Fn are constructed. An explicit diagonal on Fn is defined and a multiplicative model for the free loop fibration ΩY→ΛY→Y is obtained. As an application we establish an algebra isomorphism H^∗(ΛY;Z)≈S(U)⊗Λ(s−1U) for the polynomial cohomology algebra H^∗(Y;Z)=S(U).