Modeling of real 20-component protein chains: Determination of the electronic density of states of aperiodic seven-component polypeptide chains containing strongly different amino acid residues

To model a real 20-component protein chain, the results of the electronic density of states (DOS ) of seven-component periodic and aperiodic polypeptide chains calculated on the basis of ab initio matrix block negative factor counting method are presented. The seven amino acid residues taken into account are rather different: glycine, serine, cysteine, asparagine, histidine, aspartic acid, and tryptophane. In the case of aperiodic chains, the energy states are found to be distributed over a much wider range of energy than in the corresponding periodic chains. In the intrinsic state, both periodic and aperiodic polypeptide chains are predicted to be insulators. The effect of the block copolymerization on the DOS distribution and the band gap values of both periodic and aperiodic polypeptide chains has been also investigated. Finally, the methods to calculate from the DOS curves hopping conductivities and the possibilities to compare them with experiment are outlined.     

Determination of phenols in water samples by single-drop microextraction followed by in-syringe derivatization and gas chromatography-mass spectrometric detection

Trace analysis of phenolic compounds in water was performed by coupling single-drop microextraction (SDME) with in-syringe derivatization of the analytes and GC-MS analysis. The analytes were extracted from a 3ml sample solution using 2.5microl of hexyl acetate. After extraction, derivatization was carried out in syringe barrel using 0.5microl of N,O-bis(trimethylsilyl)acetamide. The influence of derivatizing reagent volume, derivatization time and temperature on the yield of the in-syringe silylation was investigated. Derivatization reaction is completed in 5min at 50 degrees C. Experimental SDME parameters, such as selection of organic solvent, sample pH, addition of salt, extraction time and temperature of extraction were studied. Analytical parameters, such as enrichment factor, precision, linearity and detection limits were also determined. The limits of detection were in the range of 4-61ng/l (S/N=3). The relative standard deviations obtained were between 4.8 and 12% (n=5).     

Spectral and chemical determination of copolymer composition of poly (butyl acrylate-co-glycidyl methacrylate) from emulsion polymerization

Batch emulsion polymerization was used for preparing poly(butyl acrylate-co-glycidyl methacrylate) with different copolymer compositions at 75 °C with potassium persulfate as an initiator. Solubility and gel content of the prepared copolymers were studied. Four different spectral (¹H-NMR and FTIR) and chemical (elemental analysis and titration) methods were used to determine the copolymer composition. The epoxy was used as a key functional group, particularly in FTIR and titration methods of quantification. Results obtained from the chemical methods showed good agreement with those of the spectral methods. Effects of some probable phenomena occurring during copolymerization were investigated to account for differences of data obtained from the different analytical methods. Finally, the methods were compared and ¹H-NMR and elemental analysis were recognized as preferred approaches for the copolymer composition determination.     

A Fujiwara-Moritani-Type Alkenylation Using a Traceless Directing Group Strategy: A Rare Example of C−C Bond Formation towards the C2-Carbon of Terminal Alkenes

Herein we report, a rhodium-catalyzed Fujiwara-Moritani-type reaction of unactivated terminal alkenes and benzoic acid derivatives bearing electron donating residues under mild conditions. The acid functionality acts as a traceless directing group delivering products alkenylated in meta-position to the electron donating substituent in contrast to the usually obtained ortho- and para-substitution in Friedel-Crafts-type reactions. Remarkably, the new C−C bond is formed to the C2 of the terminal olefin, in contrast to similar reported transformations. Initially formed mixtures of exo- and endo-double bond isomers can be efficiently isomerized to the more stable endo-products.     

Highly efficient, one-pot, solvent-free synthesis of 2,4,6-triarylpyridines using a Br?nsted-acidic ionic liquid as reusable catalyst

Abstract  

A simple, efficient, and green method for synthesis of 2,4,6-triarylpyridines by one-pot three-component reaction of acetophenones, aryl aldehydes, and ammonium acetate using 3-methyl-1-(4-sulfonylbutyl)imidazolium hydrogen sulfate [HO₃S(CH₂)₄MIM][HSO₄], a Br?nsted-acidic ionic liquid, as an effective and reusable catalyst under solvent-free conditions is described. This method has several advantages, for example simple procedure with an easy work-up, shorter reaction times, and high yields.     

Estimation of concrete compressive strength by a fuzzy logic model

Concrete mix design is a process of proportioning the ingredients in right proportions. The aim of this study is to design a fuzzy logic model for determination of the compressive strength of a concrete. The datasets which have been loaded into a fuzzy logic model contain 1,030 concrete mixtures. Input fields of the fuzzy expert system are weight percent of cement, water, blast furnace slag, fly ash, super plasticizer, fine aggregate, coarse aggregate, and age of the concrete. Output field is concrete compressive strength. Finally, 897 rules used for this fuzzy logic modeling.     

Green,rapid, and highly efficient syntheses of α,α′-bis[(aryl or allyl)idene]cycloalkanones and 2-[(aryl or allyl)idene]-1-indanones as potentially biologic compounds via solvent-free microwave-assisted Claisen–Schmidt condensation catalyzed by MoCl5

A new, green, and highly efficient protocol for the expeditious preparation of some α,α′-bis[(aryl or allyl)idene]cycloalkanones and 2-[(aryl or allyl)idene]-1-indanones via a simple microwave-assisted Claisen–Schmidt condensation reaction catalyzed by MoCl₅ was successfully developed. Outstanding features of the current methodology include the use of solvent-free conditions, simple operation, use of a very inexpensive and available catalyst, low catalyst loading, short reaction times, high yields of the pure products, no harmful by-products, easy workup, and also the applicability of microwave irradiation as a clean source of energy. Furthermore, a gram-scale reaction was successfully conducted, proving the scalability of this current Claisen–Schmidt condensation reaction.     

Quantum mechanical treatment of biopolymers as solids: Possible implications for carcinogenesis

After briefly reviewing the results of ab initio band structure calculations on periodic polynucleotides, it is shown how these band structures can be corrected for correlation (quasi particle band structures). Some new results on the electronic structure of aperiodic polypeptides (having up to four different amino acids as components) obtained with the help of the matrix block negative factor counting technique are then presented. They are supplemented by similar results calculated for nonperiodic nucleotide base stacks. Some plausible long-range effects for the activation of oncogenes through carcinogens are then reviewed. Finally, the preparation of much better defined samples of biopolymers (on which reliable physical measurements could be performed) is discussed.     

Preparation and application of the titania sol-gel coated anodized aluminum fibers for headspace solid phase microextraction of aromatic hydrocarbons from water samples

A novel titania sol-gel coating, including tetrabutyl orthototitanat (TBOT) as initial alkoxide, triethanolamine (TEA) as stabilizer, nitric acid as acid catalyst, and polyethylene glycol (PEG, 6000) as binder was prepared for the first time on an anodized aluminium wire and subsequently applied to headspace solid phase microextraction (HS-SPME) of benzene, toluene, ethylbenzene and xylenes (BTEX) with gas chromatography flame ionization detection (GC-FID). The analytical characteristics of the proposed porous titania sol-gel derived TBOT/PEG/TEA (41.6:16.0:42.4) fiber were comparable with reported fibers. The extraction temperature, extraction time, effect of salt addition, desorption temperature and desorption time were optimized. Under the optimized conditions and for all BTEX components, the linearity was from 20 to 800 μg L⁻¹, the RSD was below 8.2% and limit of detections (LODs) were between 5.4 and 14.8 μg L⁻¹. The recovery values were from 86.7% to 94.2% in water samples. The proposed HS-SPME-GC-FID method was successfully applied for the analysis of BTEX compounds from petrochemical wastewater samples.