Conformational behaviour and inclusion compound forming properties of 5,18-disubstituted derivatives of 5, 11, 12, 18-tetrahydrotribenzo[b,f,j][1,4]diazacyclododecine-6, 17-dione

An X-ray structure analysis shows that the 5, 18-dimethyl derivative ($\text{5}$) of the title compound ($\text{4}$) crystallises from xylene as a 1:1 inclusion compound in which the host molecules adopt propeller-like conformations ($\text{7}$ and $\text{7}$*) with almost perfect $\text{C}$₂ symmetry. Dynamic ¹H n.m.r. spectroscopy shows that the 5, 18-dibenzyl derivative ($\text{6}$) of ($\text{4}$) forms a 1:1 inclusion compound with ethanol in the solid state and undergoes ring inversion ($\text{7}$ ? $\text{7}$*) between enantiomeric propeller-like conformations in solution against a barrier of 21.1 kcal mol^?1     

Constructions for Terraces and R‐Sequencings,Including a Proof That Bailey's Conjecture Holds for Abelian Groups

Every abelian group of even order with a noncyclic Sylow 2‐subgroup is known to be R‐sequenceable except possibly when the Sylow 2‐subgroup has order 8. We construct an R‐sequencing for many groups with elementary abelian Sylow 2‐subgroups of order 8 and use this to show that all such groups of order other than 8 also have terraces. This completes the proof of Bailey's Conjecture in the abelian case: all abelian groups other than the noncyclic elementary abelian 2‐groups have terraces. For odd orders it is known that abelian groups are R‐sequenceable except possibly those with noncyclic Sylow 3‐subgroups. We show how the theory of narcissistic terraces can be exploited to find R‐sequencings for many such groups, including infinitely many groups with each possible of Sylow 3‐subgroup type of exponent at most 3¹² and all groups whose Sylow 3‐subgroups are of the form or .     

CaII Binding Regulates and Dominates the Reactivity of a Transition‐Metal‐Ion‐Dependent Diesterase from Mycobacterium tuberculosis

The diesterase Rv0805 from Mycobacterium tuberculosis is a dinuclear metallohydrolase that plays an important role in signal transduction by controlling the intracellular levels of cyclic nucleotides. As Rv0805 is essential for mycobacterial growth it is a promising new target for the development of chemotherapeutics to treat tuberculosis. The in vivo metal‐ion composition of Rv0805 is subject to debate. Here, we demonstrate that the active site accommodates two divalent transition metal ions with binding affinities ranging from approximately 50 nm for Mn^II to about 600 nm for Zn^II. In contrast, the enzyme GpdQ from Enterobacter aerogenes, despite having a coordination sphere identical to that of Rv0805, binds only one metal ion in the absence of substrate, thus demonstrating the significance of the outer sphere to modulate metal‐ion binding and enzymatic reactivity. Ca^II also binds tightly to Rv0805 (K_d≈40 nm ), but kinetic, calorimetric, and spectroscopic data indicate that two Ca^II ions bind at a site different from the dinuclear transition‐metal‐ion binding site. Ca^II acts as an activator of the enzymatic activity but is able to promote the hydrolysis of substrates even in the absence of transition‐metal ions, thus providing an effective strategy for the regulation of the enzymatic activity.     

The effects of substrate orientation on the mechanism of a phosphotriesterase

While the underlying chemistry of enzyme-catalyzed reactions may be almost identical, the actual turnover rates of different substrates can vary significantly. This is seen in the turnover rates for the catalyzed hydrolysis of organophosphates by the bacterial phosphotriesterase OpdA. We investigate the variation in turnover rates by examining the hydrolysis of three classes of substrates: phosphotriesters, phosphothionates, and phosphorothiolates. Theoretical calculations were used to analyze the reactivity of these substrates and the energy barriers to their hydrolysis. This information was then compared to information derived from enzyme kinetics and crystallographic studies, providing new insights into the mechanism of this enzyme. We demonstrate that the enzyme catalyzes the hydrolysis of organophosphates through steric constraint of the reactants, and that the equilibrium between productively and unproductively bound substrates makes a significant contribution to the turnover rate of highly reactive substrates. These results highlight the importance of correct orientation of reactants within the active sites of enzymes to enable efficient catalysis.     

Session 3 Bioprocessing research

Applied Biochemistry and Biotechnology -