The dipole moments of the excited states of FeC

With the purpose of comparing expectation dipole moment values mu with finite-field obtained dipole moments mu(FF), we recalculated by the finite-field method previously reported mu values of 38 excited states of FeC. In most of the cases mu(FF) is significantly larger than mu.     

The electronic structure of vanadium carbide, VC

Within an energy range of 2.4 eV, we have explored 29 of the 36 states of the diatomic molecule VC that arise from the atoms in their ground state, V(4s23d3;4F)+C(2s2 2p2;3P). We use multireference methods with large atomic natural orbital basis sets. The ground state is of 2Delta symmetry with the first two excited states, 4Delta and 2Sigma+, located 4.2 and 7.0 kcal/mol above the X state. All the states examined in this work are relatively strongly bound and show significant charge transfer from V to C. The binding energy of the X 2Delta state is estimated to be 95.3 kcal/mol in good agreement with the experimental value.     

A multireference coupled-cluster potential energy surface of diazomethane, CH(2)N(2)

The intrinsically multireference dissociation of the C-N bond in ground-state diazomethane (CH(2)N(2)) at different angles has been studied with the multireference Brillouin-Wigner coupled-cluster singles and doubles (MRBWCCSD) method. The morphology of the calculated potential energy surface (PES) in C(s)() symmetry is similar to a multireference perturbational (CASPT3) PES. The MRBWCCSD/cc-pVTZ H(2)C-N(2) dissociation energy with respect to the asymptotic CH(2)(?(1)A(1)) + N(2)(X(1)Sigma(g)(+)) products is D(e) = 35.9 kcal/mol, or a zero-point corrected D(0) = 21.4 kcal/mol with respect to the ground-state CH(2)(X(3)B(1)) + N(2)(X(1)Sigma(g)(+)) fragments.     

2,4‐Diamino‐5‐(1‐naphthyl)‐3,5‐diaza‐1‐azoniaspiro[5.5]undeca‐1,3‐diene chloride

The title salt, C₁₈H₂₂N₅⁺·Cl^?, is a member of a new series of lipophilic 4,6‐di­amino spiro‐s‐triazines which are potent in­hib­itors of di­hydro­folate reductase. The protonated triazine ring deviates from planarity, whereas the cyclo­hexane ring adopts a chair conformation. A rather unusual hydrogen‐bonding scheme exists in the crystal. There is a centrosymmetric arrangement involving two amino groups and two triazine ring N atoms, with graph‐set R(8) and an N?N distance of 3.098 (3) Å, flanked by two additional R(8) systems, involving two amino groups, a triazine ring N atom and a Cl^? anion, with N?Cl distances in the range 3.179 (2)–3.278 (2) Å. Furthermore, the Cl^? anion, the protonated triazine ring N atom and an amino group form a hydrogen‐bonding system with graph‐set R(6).     

Synthesis, Structure, and Membrane Activity of New Glycyrrhetic Acid Derivatives

Derivatives of 3-O-acetyl-18-H-glycyrrhetic acid were synthesized. Their structures and membrane activities were studied.     

Dielectric Relaxation of the β-Cyclodextrin Complexes with Tridecanoic Acid and 1,13-Tridecanedioic Acid

The frequency and temperature dependence of the real (') and imaginary (') parts of the dielectric permittivity of the polycrystalline complex-cyclodextrin-tridecanoic acid in two hydration forms (with 16.2 and 10.7 water molecules) and -cyclodextrin-1,13-tridecanedioic acid with 16.4 and 10.5 water molecules have been investigated, in the frequency range 0.1–100 kHz and temperature range 120–310 K. The dielectric behavior is described well by Debye-type relaxation dispersion. All systems except for the complex of partially dehydrated monocarboxylic acid, exhibit an additional -dispersion, at low frequencies (f < 1000 Hz). Only one-step was found in the ' vs. Tplots of both complexes in the two hydration forms, a fact indicating that the watermolecules cannot be divided into strongly bound and easily movable molecules. The'vs. T plots, at a fixed frequency (200 Hz), show the characteristic peakattributed to a transition between ordered and disordered -CD hydroxyl groupsand water molecules. The transition temperature was 202.7 K for all systems examinedexcept for the complex -CD-tridecanoic acid.16.2 H₂O (214.5 K). This means that the order to disorder transformation process was unaffected by the dehydration process in the case of the dicarboxylic acid complex, whereas in the case of the monocarboxylic acid, it was unexpectedly facilitated. The relaxation time varies with temperature, in a like curve (in the range 8–14 s), with maximum values located at the corresponding order-disorder transition temperatures. The activation energies of the fully hydrated complexes have absolute values of 5 kJ/mol in the range 1.98–3.82 K_{BT transition} which are higher than the corresponding values of :2 kJ/mol of the dehydrated complexes. A thermal hysteresis observed in all complexes is a result of the order-disorder transformation.     

Comprehensive comparison of ligand-based virtual screening tools against the DUD data set reveals limitations of current 3D methods

In recent years, many virtual screening (VS) tools have been developed that employ different molecular representations and have different speed and accuracy characteristics. In this paper, we compare ten popular ligand-based VS tools using the publicly available Directory of Useful Decoys (DUD) data set comprising over 100?000 compounds distributed across 40 protein targets. The DUD was developed initially to evaluate docking algorithms, but our results from an operational correlation analysis show that it is also well suited for comparing ligand-based VS tools. Although it is conventional wisdom that 3D molecular shape is an important determinant of biological activity, our results based on permutational significance tests of several commonly used VS metrics show that the 2D fingerprint-based methods generally give better VS performance than the 3D shape-based approaches for surprisingly many of the DUD targets. To help understand this finding, we have analyzed the nature of the scoring functions used and the composition of the DUD data set itself. We propose that to improve the VS performance of current 3D methods, it will be necessary to devise screening queries that can represent multiple possible conformations and which can exploit knowledge of known actives that span multiple scaffold families.     

The electronic structure of Ti2 and Ti2(+)

The Ti(2) and Ti(2)(+) molecular systems have been studied through multireference variational and single reference coupled-cluster methods coupled with large basis sets. Potential energy curves have been constructed for 30 (Ti(2)) and 2 (Ti(2)(+)) states and the usual spectroscopic parameters have been extracted. The main feature of the potential curves is the existence of van der Waals minima (Ti(2)) around 7 bohr irrespective of the molecular symmetry, and 4s(2)-4s(1) interactions (Ti(2)(+)) around 6 bohr. Numerous avoided crossings lead to stronger covalent bonds emanating from 4s(1)-4s(1) atomic distributions. The X-state of the neutral species is formally a (3)Δ(g) state with the first excited state lying within 1 kcal/mol. The removal of the symmetry defining e(-) leads to the X(2)Σ(g)(+) state of Ti(2)(+).     

Real-time monitoring of nanomolar binding to a cyclodextrin monolayer immobilized on a Si/SiO2/novolac surface using white light reflectance spectroscopy: the case of triclosan

The monitoring of the antibacterial agent triclosan binding at nanomolar concentration from an aqueous solution by employing a well-packed monolayer with a predetermined single orientation made of specifically synthesized 2,3-dimethyl-6-(undec-10-enamide)-6-deoxy-β-cyclodextrin (DMBUA) on a silicon wafer (Si/SiO(2)) coated with a novolac resin is reported. A white light reflectance spectroscopy (WLRS) setup was used for the real-time monitoring of the DMBUA deposition and triclosan binding processes. Film thicknesses obtained by WLRS were in very good agreement with the ones measured by X-ray reflectivity (XRR) experiments. Triclosan binds strongly to the DMBUA monolayer (logK(assoc)=6.68). NMR studies in aqueous solution indicated that the chlorophenolyl ring rather than the dichlorophenyl ring is preferentially inserted into DMBUA cups. The current detecting system that requires no tedious surface chemistry, no thiolated cyclodextrins, no gold surfaces, and no expensive equipment may be useful in capturing small molecules and may permit various applications, e.g., preparation of antimicrobial surfaces.