Ultrafast interferometric measurements of plasmonic transport in photonic crystals

We present a novel time-domain experimental approach to the study of the dynamics of surface electromagnetic wave propagation in a two-dimensional photonic crystal. A surface plasmon polariton is launched by ultrafast laser pulses and propagates into a photonic crystal, the dynamics of which are measured by an interferometric cross-correlation method. Plasmon photonic stopgaps are characterized by a single measurement. The dispersion around the stopgaps is determined with a series of angle-resolved measurements.     

Proteomics of snake venoms from Elapidae and Viperidae families by multidimensional chromatographic methods

Snake venoms contain a large number of biologically active substances and the venom components are very useful for pharmaceutical applications. Our goal is to separate and identify components of snake venoms in ten snake species from the Elapidae and Viperidae families using multidimensional chromatographic methods. The multidimensional chromatographic methods include reversed-phase high-performance liquid chromatography (RP-HPLC), sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), lab-on-a-chip, two-dimensional electrophoresis (2-DE), and mass spectrometry. The venoms of eight snake species demonstrated major differences in hydrophobicity, molecular weight separations, and 2-DE protein distribution patterns. The 2-DE images showed major differences between families, within each family and even between the same species. Venoms of the Elapidae family showed many basic proteins with a wide range of molecular weights, while venoms of the Viperidae family showed wide ranges of pI and molecular weights, especially for Trimeresurus sp. The multidimensional chromatographic methods revealed specific differences in venom proteins intra-species as well as between species and families. We have isolated and identified proteins that may be unique for each species for further studies in the proteome of snake venoms and their potentially use in the pharmaceutical applications.     

Identification of archaeal proteins that affect the exosome function in vitro

Background  

The archaeal exosome is formed by a hexameric RNase PH ring and three RNA binding subunits and has been shown to bind and degrade RNA in vitro. Despite extensive studies on the eukaryotic exosome and on the proteins interacting with this complex, little information is yet available on the identification and function of archaeal exosome regulatory factors.     

A relational perspective of attribute reduction in rough set-based data analysis

Attribute reduction is very important in rough set-based data analysis (RSDA) because it can be used to simplify the induced decision rules without reducing the classification accuracy. The notion of reduct plays a key role in rough set-based attribute reduction. In rough set theory, a reduct is generally defined as a minimal subset of attributes that can classify the same domain of objects as unambiguously as the original set of attributes. Nevertheless, from a relational perspective, RSDA relies on a kind of dependency principle. That is, the relationship between the class labels of a pair of objects depends on component-wise comparison of their condition attributes. The larger the number of condition attributes compared, the greater the probability that the dependency will hold. Thus, elimination of condition attributes may cause more object pairs to violate the dependency principle. Based on this observation, a reduct can be defined alternatively as a minimal subset of attributes that does not increase the number of objects violating the dependency principle. While the alternative definition coincides with the original one in ordinary RSDA, it is more easily generalized to cases of fuzzy RSDA and relational data analysis.     

TH‐11, a Streptomyces sp. Strain that Degrades Poly(3‐Hydroxybutyrate) and Poly(Ethylene Succinate)

TH‐11, a bacterial strain with strong depolymerase activity that breaks down aliphatic esters such as poly(3‐hydroxybutyrate) (PHB) and poly(ethylene succinate) (PES) was isolated from a soil sample collected from the sediment of Tou‐Chain River, Taiwan, R.O.C. It was phenotypically and genetically characterized to be a Streptomyces strain. The degradation of PHB and PES were tested both using emulsified polymers in solid agar and thin polymer films in liquid culture media. The degradations were measured by clear‐zone formation on solid agar plates, or direct weight measurements and electromicroscope inspection of the incubated polymer films in the liquid culture. The depolymerase activities can be detected in the cell‐free preparation of the culture medium, and can be enhanced by gelatin.     

High precision delta(17)O isotope measurements of oxygen from silicates and other oxides: method and applications

The use of infrared laser-assisted fluorination to release oxygen from milligram quantities of silicates or other oxide mineral grains is a well-established technique. However, relatively few studies have reported the optimisation of this procedure for oxygen-17 isotope measurements. We describe here details of an analytical system using infrared (10 μm) laser-assisted fluorination, in conjunction with a dual inlet mass spectrometer of high resolving power ( approximately 250) to provide (17)O and (18)O oxygen isotope measurements from 0.5-2 mg of silicates or other oxide mineral grains. Respective precisions (1) of typically 0.08 and 0.04 per thousand are obtained for the complete analytical procedure. Departures from the mass-dependent oxygen isotope fractionation line are quantified by Delta(17)O; our precision (1) of such measurements on individual samples is shown to be +/-0.024 per thousand. In turn, this permits the offset between parallel, mass-dependent fractionation lines to be characterised to substantially greater precision than has been possible hitherto. Application of this system to investigate the (17)O versus (18)O relationship for numerous terrestrial whole-rock and mineral samples, of diverse geological origins and age, indicates that the complete data set may be described by a single, mass-dependent fractionation line of slope 0.5244+/- 0.00038 (standard error). Copyright 1999 John Wiley & Sons, Ltd.