Photoreactivation of RNA in UV-irradiated insect eggs (Smittia sp., Chironomidae, Diptera) II. Evidence for heterogeneous light-dependent repair activities

Abstract. Two biological effects of UV radiation upon Smittia eggs are observed, both of which seem to be associated with the formation of pyrimidine dimers in the RNA (largely ribosomal) of the eggs. While irradiation of the anterior pole region causes the formation of an aberrant segment pattern (double abdomen induction), irradiation of entire eggs leads to an arrest of their development (inactiva-tion). Both UV effects are photoreversible with different action spectra of the photoreactivating light. A dose rate dependence of the photoreactivation can be observed after both UV effects. The saturating dose rate is about 6 W/m² (at 440 nm) after UV induction of double abdomens. Upon UV inactivation, the saturating dose rate level for the photoreactivating light is much higher, and a single light flash causes both a considerable biological reactivation and the disappearance of about 7 × 10⁹ pyrimidine dimers from the total RNA per egg. The results indicate the presence of heterogeneous light-dependent repair activities acting upon UV induced pyrimidine dimers in the RNA of the eggs.     

Nachweis und Bestimmung des Mangans sowie seine Trennung von anderen Elementen

Ohne Zusammenfassung     

MONOCLONAL ANTIBODY WITH SPECIFIC AFFINITY FOR PYRIMIDINE DIMERS IN RNA

Abstract— A monoclonal antibody was prepared which meets three criteria for specific binding to pyrimidine dimers in RNA. (i) UV irradiation at wavelengths greater than 300 nm in the presence of a triplet state sensitizer, or at 270 nm without sensitizer, promotes antibody binding to RNA and polyribonucleotides, (ii) Antibody binding is reduced by exposure to UV radiation of short wavelength (240 nm) following sensitized irradiation (<300 nm). (iii) Antibody binding is dependent upon the presence of adjacent pyrimidine ribonucleotides. The antibody recognizes a single uridine dimer with one or more additional nucleotides at both ends. Affinity for a single uridine dimer with additional nucleotides at only the 3' end is substantially weaker.     

Photosensitized formation of RNA-protein crosslinks in an insect egg (Smittia spec., Chironomidae, Diptera)

Abstract—Upon irradiation of Smittia eggs with ultraviolet light (UV), the extractability of RNA with phenol decreased. The strongest decrease was observed after irradiation at 295 nm wavelength. After trypsin treatment, RNA could be recovered to the same degree as from unirradiated eggs. The extractability of RNA from irradiated eggs was not enhanced by formamide. dimethyl sulfoxide. high salt concentration or heat treatment. The results suggest that the UV-mediated formation of RNA-protein crosslinks in Smittia eggs involves the action of a photosensitizer.     

Photoreactivation of RNA in UV-irradiated insect eggs (Smittia sp., Chironomidae, Diptera) I. Photosensitized production and light-dependent disappearance of pyrimidine dimers

Abstract. Irradiation of Smittia eggs with UV during intravitelline cleavage causes the formation of pyrimidine dimers in the (largely ribosomal) RNA of the eggs. The yield of dimers is wavelength-dependent in a way that strongly suggests the involvement of photosensitizing egg components. Illumination of UV-irradiated eggs with light (380 or 400 nm) causes both photoreactivation of the eggs and mono-merization of the pyrimidine dimers in their RNA. The photoreactivable sector of the biological damage is correlated with the amount of pyrimidine dimers present in the RNA after inactivation of the eggs with UV of different wavelengths. The data are regarded as the first direct evidence that the photoreactivation of a eukaryotic organism is correlated with the light-dependent (and apparently enzymatic) monomerization of pyrimidine dimers in RNA.     

Photosensitized Intermolecular Carboimination of Alkenes through the Persistent Radical Effect

An intermolecular, two‐component vicinal carboimination of alkenes has been accomplished by energy transfer catalysis. Oxime esters of alkyl carboxylic acids were used as bifunctional reagents to generate both alkyl and iminyl radicals. Subsequently, addition of the alkyl radical to an alkene generates a transient radical for selective radical–radical cross‐coupling with the persistent iminyl radical. Furthermore, this process provides direct access to aliphatic primary amines and α‐amino acids by simple hydrolysis.     

Comparison of the iterated equation of motion approach and the density matrix formalism for the quantum Rabi model

The density matrix formalism and the equation of motion approach are two semi-analytical methods that can be used to compute the non-equilibrium dynamics of correlated systems. While for a bilinear Hamiltonian both formalisms yield the exact result, for any non-bilinear Hamiltonian a truncation is necessary. Due to the fact that the commonly used truncation schemes differ for these two methods, the accuracy of the obtained results depends significantly on the chosen approach. In this paper, both formalisms are applied to the quantum Rabi model. This allows us to compare the approximate results and the exact dynamics of the system and enables us to discuss the accuracy of the approximations as well as the advantages and the disadvantages of both methods. It is shown to which extent the results fulfill physical requirements for the observables and which properties of the methods lead to unphysical results.     

PHOTOREVERSIBLE UV-INACTIVATION OF MESSENGER RNA IN AN INSECT EMBRYO (SMITTIA SPEC., CHIRONOMIDAE, DIPTERA)

Smittia embryos were UV-irradiated during intravitelline cleavage. At this stage, nuclei are heavily shielded by yolk-rich cytoplasm, and do not synthesize detectable amounts of RNA. Irradiation at 265, 285 and 295 nm wavelength caused biological inactivation, and pyrimidine dimer formation in maternal RNA as described earlier (Kalthoff, 1976; Jäckie and Kalthoff, 1978). In addition, we observed marked effects on protein synthesis: (1) The overall rate of [³⁵S]-methionine incorporation in vivo was reduced to less than half of the normal rate. (2) Two-dimensional gel electrophoresis revealed quantitative variations in the synthetic rate of some polypeptides, and the appearance of new ones in UV-irradiated embryos. (3) Translation of polyadenylated RNA from Smittia embryos in a cell-free system was inhibited by UV irradiation in vivo. (4) The apparent degradation, during early embryogenesis, of maternal polyadenylated RNA was retarded in UV-irradiated embryos. Exposure to light (400 nm) after UV caused partial photoreversal of all UV effects observed. Both the photoreactivable sector of UV-inactivation, and the photoreactivated portion of UV inhibition of protein synthesis, were correlated with the amounts of pyrimidine dimers generated in maternal RNA by UV irradiation at the three wavelengths used. These correlated effects were produced most efficiently by 295 nm radiation, indicating the involvement of photosensitizing components in the embryos. Our data show, for the first time to our knowledge, that animal mRNA, after UV irradiation, can be photoreactivated in vivo. Moreover, our results strongly suggest that the photorepairable lesions consist of pyrimidine dimers generated in a photosensitized reaction.