Antioxidative and anticarcinogenic activities of methylpheophorbide a,isolated from wheat grass (Triticum aestivum Linn.)

Methylphophorbide a (MPa) has been isolated from the ethanol extract of the wheat grass plant. Its antioxidative efficacy is evaluated by hydroxyl radical scavenging activities and reducing capacity which are significantly up regulated in comparison with aqueous extract of the plant. The compound shows iron-binding capacity where the Fe²⁺ binds with MPa by two types of binding patterns with dissociation constants 157.17 and 27.89. It has antioxidative and cytotoxic effects on HeLa and Hep G2 cells. The cancerous cell survivability decreases with increasing concentration of MPa. These findings have provided evidence for the traditional use of the wheat grass plant in the treatment of cancers, oxidative stress and iron overloaded disorders.     

Search of truncation of (N−1) electron basis containing full connected triple excitations in computing main and satellite ionization potentials via Fock‐space coupled cluster approach

A valence‐universal multireference coupled cluster (VUMRCC) theory, realized via the eigenvalue independent partitioning (EIP) route, has been implemented with full inclusion of triples excitations for computing and analyzing the entire main and several satellite peaks in the ionization potential spectra of several molecules. The EIP‐VUMRCC method, unlike the traditional VUMRCC theory, allows divergence‐free homing‐in to satellite roots which would otherwise have been plagued by intruders, and is thus numerically more robust to obtain more efficient and dependable computational schemes allowing more extensive use of the approach. The computed ionization potentials (IPs) as a result of truncation of the (N−1) electron basis manifold involving virtual functions such as 2h‐p and 3h‐2p by different energy thresholds varying from 5 to 15 a.u. with 1 a.u. intervals as well as thresholds such as 20, 25, and 30 a.u. have been carefully looked into. Cutoff at around 25 a.u. turns out to be an optimal threshold. Molecules such as C₂H₄ and C₂H₂ (X = D,T), and N₂ and CO (X = D,T,Q) with Dunning's cc‐pVXZ bases have been investigated to determine all main and 2h‐p shake‐up and 3h‐2p double shake‐up satellite IPs. We believe that the present work will pave the way to a wider application of the method by providing main and satellite IPs for some problematic N‐electron closed shell systems. © 2013 Wiley Periodicals, Inc.     

Phenanthroline-fluorescein molecular hybrid as a ratiometric and selective fluorescent chemosensor for Cu2+ via FRET strategy: synthesis,computational studies and in vitro applications

A FRET-based chemosensor L containing donor phenanthroline and acceptor fluorescein moiety was designed, synthesised and characterised for the ratiometric fluorescent detection of Cu²⁺ in organo-aqueous solution. Probe L showed high selectivity and excellent sensitivity towards Cu²⁺ ions by exhibiting both colorimetric and fluorometric changes due to opening of the spirolactum ring of fluorescein upon complexation with Cu²⁺. In presence of Cu²⁺ ions, probe L formed L-Cu²⁺ complex in 1:1 stoichiometric fashion which is established on the basis of Job’s plot and mass spectroscopy. We also performed DFT computational studies to know the binding nature and coordination feature of the complex. Furthermore, fluorescence imaging studies revealed that probe L was cell permeable and could be used to detect intracellular Cu²⁺ in living cells.     

Reactions of [Mn2(μ-pyS)2(CO)6] with bidentate N-donor ligands: Crystal structure of [Mn(η1-pyS)(bipy)(CO)3] (bipy = 2,2′-bipyridyl, pySH = pyridine-2-thiol)

The dimeric complex [Mn₂(-pyS)₂(CO)₆] (1) reacted with 2 equivalents of 2,2-bipyridyl (bipy), 1,10-phenanthroline (phen), and ethylenediamine (en) to give the corresponding monomeric complexes [Mn(¹-pyS)(bipy)(CO)₃] (2), [Mn(¹-pyS)(phen)(CO)₃] (3), and [Mn( ¹-pyS)(en)(CO)₃] (4). The pyS ligand in these complexes acts as a monodentate, two-electron donor ligand, which coordinates to manganese through the sulfur atom. This is confirmed by an X-ray structure determination of 2, which contains two structural isomers in the asymmetric unit. Crystals of this compound are the monoclinic, space group P2 ₁/c, a = 21.593(4), b = 10.463(2), c = 16.385(3) Å, = 102.468(13)°, V = 3614.5(12) ų, and Z = 8. The three CO groups are facially distributed in both isomers, but the relative positions of the pyS and bipy ligands are different.     

Atroposelective PIII/PV=O Redox Catalysis for the Isoquinoline-Forming Staudinger–aza-Wittig Reaction

Herein, we describe the feasibility of atroposelective P^III/P^V=O redox organocatalysis by the Staudinger–aza-Wittig reaction. The formation of isoquinoline heterocycles thereby enables the synthesis of a broad range of valuable atropisomers under mild conditions with enantioselectivities of up to 98 : 2 e.r. Readily prepared azido cinnamate substrates convert in high yield with stereocontrol by a chiral phosphine catalyst, which is regenerated using a silane reductant under Brønsted acid co-catalysis. The reaction provides access to diversified aryl isoquinolines, as well as benzoisoquinoline and naphthyridine atropisomers. The products are expeditiously transformed into N-oxides, naphthol and triaryl phosphine variants of prevalent catalysts and ligands. With dinitrogen release and aromatization as ideal driving forces, it is anticipated that atroposelective redox organocatalysis provides access to a multitude of aromatic heterocycles with precise control over their configuration.     

Hydration structure of Na+ and K+ from ab initio molecular dynamics based on modern density functional theory

Molecular dynamics (Born–Oppenheimer) simulations based on density functional theory have been carried out to investigate the solvation structure of monovalent Na⁺ and K⁺ cations in water under ambient conditions. Four recently proposed van der Waals (vdW) density functionals (LMKLL, DRSLL, DRSLL-PBE, DRSLL-optB88), the semiempirical vdW method of Grimme (BLYP-D3) and conventional gradient-corrected (GGA-BLYP) density functionals are applied in order to evaluate their accuracy in describing the hydration structure of alkali metal ions. Theoretical results are compared to available experimental data. Our results indicate that addition of corrections accounting for dispersion forces significantly improves the agreement between predicted and measured coordination numbers for both Na⁺ and K⁺ cations. Analysis of radial distribution functions brings further support to the notion that the choice of the generalised gradient approximation density functional impacts crucially on the computed structural properties. DRSLL-optB88 and BLYP-D3 provide the best agreement with experiment.     

Reaction between [Ru3(CO)10(μ-dppm)] (dppm = Ph2PCH2PPh2) and Te2(C6H4OEt-4)2: X-ray crystal structure of [Ru2(CO)6{μ-C6H4PPh(CH2)PPh}]

Treatment of [Ru₃(CO)₁₀(-dppm)] (1) with the ditelluride Te₂(C₆H₄OEt-4)₂ in refluxing toluene afforded the new aryltellurol bridged complex [Ru₂(CO)₄(-TeC₆H₄OEt-4)₂ (-dppm)] (2) together with three known complexes [Ru₄(CO)₈(-CO)(₄-Te)₂(-dppm)] (3), [Ru₂(CO)₆{-CH₂PPh(C₆H₄)PPh}] (4), and [Ru₂(CO)₆{-C₆H₄PPh(CH₂)PPh}] (5). All the four complexes were characterized by spectroscopic methods, including an X-ray structure determination for 5. Complex 5 crystallizes in the monoclinic space group P2₁/c with a = 13.650(2), b = 9.995(2), c = 18.929(3) Å, = 97.49(2)°, V = 2560.4(8) ų, and Z = 4. In this complex the two ruthenium atoms are bridged by the phosphino-phosphide ligand C₆H₄PPh(CH₂)PPh which is attached to one Ru by the C₆H₄ group and a P atom while to the other Ru by both the two P atoms. Both the ruthenium atoms show distorted octahedral geometry. The Ru—Ru bond length is 2.8719(7) Å.     

Unique Fluorogenic Ratiometric Fluorescent Chemodosimeter for Rapid Sensing of CN− in Water

A new benzimidazole‐spiropyran conjugate chemosensor molecule ( BISP ) has been synthesized and characterized by ¹H NMR spectroscopy, mass spectrometry (ESI‐MS), and elemental analysis. The two isomeric forms ( BISP ? BIMC ) were shown to be highly selective and sensitive to CN^? among the ten anions studied in aqueous HEPES buffer, as shown by fluorescence and absorption spectroscopy and even by visual color changes, with a detection limit of 1.7 μM for BIMC . The reaction of CN^? with BIMC was monitored by ¹H NMR spectroscopy, high‐resolution mass spectrometry (HRMS), UV/Vis measurements, and fluorescence spectroscopy in HEPES buffer of pH 7.4. TDDFT calculations were performed in order to correlate the electronic properties of the chemosensor with its cyanide complex. Further, titration against thiophilic metal ions like Au³⁺, Cu²⁺, Ag⁺, and Hg²⁺ with [ BIMC‐CN ] in situ showed that it acts as a secondary recognition ensemble toward Au³⁺ and Cu²⁺ by switch‐on fluorescence. In addition, a reversible logic‐gate property of BIMC has been demonstrated through a feedback loop in the presence of CN^? and Au³⁺ ions, respectively. Furthermore, the use of BIMC to detect CN^? in live cells by fluorescence imaging has also been demonstrated. Notably, test strips based on BIMC were fabricated, which could serve as convenient and efficient CN^? test kits.     

A QM/MM simulation study of transamination reaction at the active site of aspartate aminotransferase: Free energy landscape and proton transfer pathways

Transaminase is a key enzyme for amino acid metabolism, which reversibly catalyzes the transamination reaction with the help of PLP (pyridoxal 5^' -phosphate) as its cofactor. Here we have investigated the mechanism and free energy landscape of the transamination reaction involving the aspartate transaminase (AspTase) enzyme and aspartate-PLP (Asp-PLP) complex using QM/MM simulation and metadynamics methods. The reaction is found to follow a stepwise mechanism where the active site residue Lys258 acts as a base to shuttle a proton from α -carbon (CA) to imine carbon (C4A) of the PLP-Asp Schiff base. In the first step, the Lys258 abstracts the CA proton of the substrate leading to the formation of a carbanionic intermediate which is followed by the reprotonation of the Asp-PLP Schiff base at C4A atom by Lys258. It is found that the free energy barrier for the proton abstraction by Lys258 and that for the reprotonation are 17.85 and 3.57 kcal/mol, respectively. The carbanionic intermediate is 7.14 kcal/mol higher in energy than the reactant. Hence, the first step acts as the rate limiting step. The present calculations also show that the Lys258 residue undergoes a conformational change after the first step of transamination reaction and becomes proximal to C4A atom of the Asp-PLP Schiff base to favor the second step. The active site residues Tyr70* and Gly38 anchor the Lys258 in proper position and orientation during the first step of the reaction and stabilize the positive charge over Lys258 generated at the intermediate step.