Crystallization of Arthrobacter sp. strain 1C N-(1-D-carboxyethyl)-L-norvaline dehydrogenase and its complex with NAD+

The novel NAD+-linked opine dehydrogenase from a soil isolate Arthrobacter sp. strain 1C belongs to an enzyme superfamily whose members exhibit quite diverse substrate specificites. Crystals of this opine dehydrogenase, obtained in the presence or absence of co-factor and substrates, have been shown to diffract to beyond 1.8 ? resolution. X-ray precession photographs have established that the crystals belong to space group P21212, with cell parameters a = 104.9, b = 80.0, c = 45.5 ? and a single subunit in the asymmetric unit. The elucidation of the three-dimensional structure of this enzyme will provide a structural framework for this novel class of dehydrogenases to enable a comparison to be made with other enzyme families and also as the basis for mutagenesis experiments directed towards the production of natural and synthetic opine-type compounds containing two chiral centres.     

Covalent Immobilization of β-Glucosidase on Magnetic Particles for Lignocellulose Hydrolysis

β-Glucosidase hydrolyzes cellobiose to glucose and is an important enzyme in the consortium used for hydrolysis of cellulosic and lignocellulosic feedstocks. In the present work, β-glucosidase was covalently immobilized on non-porous magnetic particles to enable re-use of the enzyme. It was found that particles activated with cyanuric chloride and polyglutaraldehyde gave the highest bead-related immobilized enzyme activity when tested with p-nitrophenyl-β-D-glucopyranoside (104.7 and 82.2 U/g particles, respectively). Furthermore, the purified β-glucosidase preparation from Megazyme gave higher bead-related enzyme activities compared to Novozym 188 (79.0 and 9.8 U/g particles, respectively). A significant improvement in thermal stability was observed for immobilized enzyme compared to free enzyme; after 5 h (at 65 °C), 36 % of activity remained for the former, while there was no activity in the latter. The performance and recyclability of immobilized β-glucosidase on more complex substrate (pretreated spruce) was also studied. It was shown that adding immobilized β-glucosidase (16 U/g dry matter) to free cellulases (8 FPU/g dry matter) increased the hydrolysis yield of pretreated spruce from ca. 44 % to ca. 65 %. In addition, it was possible to re-use the immobilized β-glucosidase in the spruce and retain activity for at least four cycles. The immobilized enzyme thus shows promise for lignocellulose hydrolysis.     

Laser ablation-induced gas and flyer ejection from composite films applied to regulation of a liquid micro-stream

We have developed laser-ignitable gas generating films to control a liquid stream for use in micro processing that can be ignited with both continous wave (CW) and pulsed lasers. Films of 100 m thick polyethylene terephthalate (PET) were coated with mixtures of nitrocellulose, trimethylolethanetrinitrate, and carbon black. A light beam from a Nd:YAG laser diode, or an Ar⁺ laser was focused onto the nitrocellulose layer through the PET substrate to ignite the layer. In the case of CW irradiation the delay time between the onset of irradiation and the ignition of the films was established by measuring the transmission of the laser light passing through the films. Gas generation dynamics were studied as a function of film thickness and irradiation conditions. In the case of pulsed laser irradiation, the dynamics were followed by imaging using a conventional double pulse pump-probe technique, with which it was possible to observe material ejection and the transient disturbance of a micro liquid stream in the path of emitted debris.PACS 79.20.Ds; 41.75.Jv; 61.80.Ba     

Micro-patterning of multiple organic molecules by laser implantation

Micrometer pixelated arrays comprised of different functional organic molecules were formed on a polymer film using a laser implantation and transfer dry processing technique. The spatial distribution of the implanted organic molecules and the extended pattern that they formed could be controlled with high resolution as determined using fluorescence microscopy. The individual molecular implant pixels had a diameter of less than 4 m. This method of molecular manipulation is both precise and reproducible and could therefore be used in many applications such as molecular devices, molecular sensors, non-linear optical devices, drug delivery and opto-electronic displays. PACS 81.05.Lg; 81.16.Mk; 81.65.Cf     

Sub-micrometer patterns of molecular photo-switches using laser induced molecular implantation techniques (LIMIT)

Using laser induced molecular implantation techniques (LIMIT) in thin polymer films highly space selective patterning of photochromic molecules has been created of 800 nm dimensions. In this way diffraction gratings have been fabricated which operate as photo-switching devices. These transient gratings are permanent molecular implants in a polymer films that can be UV-irradiation activated or thermally deactivated. No further grating writing is required for this transient switching effect once the permanent implantation has been made.     

Graphene Liquid Marbles as Photothermal Miniature Reactors for Reaction Kinetics Modulation

We demonstrate the fabrication of graphene liquid marbles as photothermal miniature reactors with precise temperature control for reaction kinetics modulation. Graphene liquid marbles show rapid and highly reproducible photothermal behavior while maintaining their excellent mechanical robustness. By tuning the applied laser power, swift regulation of graphene liquid marble’s surface temperature between 21–135 °C and its encapsulated water temperature between 21–74 °C are demonstrated. The temperature regulation modulates the reaction kinetics in our graphene liquid marble, achieving a 12‐fold superior reaction rate constant for methylene blue degradation than at room temperature.     

Isostructural self-assembly of 2'-deoxyguanosine derivatives in aqueous and organic media

We report the self-assembly of a hydrophilic 8-(m-acetylphenyl)-2'-deoxyguanosine (mAG) derivative into a discrete and thermally stable hexadecameric supramolecule in aqueous media. We demonstrate that this hexadecamer is isostructural to the one formed by a related lipophilic derivative in organic media. This mAG moiety represents a rare example of a small-molecule recognition motif that is capable of assembling isostructurally and with high fidelity in both organic and aqueous media.     

Examining the Potential of Plasma-Assisted Pretreated Wheat Straw for Enzyme Production by <Emphasis Type="Italic">Trichoderma reesei</Emphasis>

Plasma-assisted pretreated wheat straw was investigated for cellulase and xylanase production by Trichoderma reesei fermentation. Fermentations were conducted with media containing washed and unwashed plasma-assisted pretreated wheat straw as carbon source which was sterilized by autoclavation. To account for any effects of autoclavation, a comparison was made with unsterilized media containing antibiotics. It was found that unsterilized washed plasma-assisted pretreated wheat straw (which contained antibiotics) was best suited for the production of xylanases (110 IU ml⁻¹) and cellulases (0.5 filter paper units (FPU) ml⁻¹). Addition of Avicel boosted enzyme titers with the highest cellulase titers (1.5 FPU ml⁻¹) found with addition of 50 % w/w Avicel and with the highest xylanase production (350 IU ml⁻¹) reached in the presence of 10 % w/w Avicel. Comparison with enzyme titers from other nonrefined feedstocks suggests that plasma pretreated wheat straw is a promising and suitable substrate for cellulase and hemicellulase production.     

Surface modification of chromatography adsorbents by low temperature low pressure plasma

In this study we show how low temperature glow discharge plasma can be used to prepare bi-layered chromatography adsorbents with non-adsorptive exteriors. The commercial strong anion exchange expanded bed chromatography matrix, Q HyperZ, was treated with plasmas in one of two general ways. Using a purpose-designed rotating reactor, plasmas were employed to either: (i) remove anion exchange ligands at or close to the exterior surface of Q HyperZ, and replace them with polar oxygen containing functions (‘plasma etching and oxidation’); or (ii) bury the same surface exposed ligands beneath thin polymer coatings (‘plasma polymerization coating’) using appropriate monomers (vinyl acetate, vinyl pyrrolidone, safrole) and argon as the carrier gas. X-ray photoelectron spectroscopy analysis (first ∼10 nm depth) of Q HyperZ before and after the various plasma treatments confirmed that substantial changes to the elemental composition of Q HyperZ's exterior had been inflicted in all cases. The atomic percent changes in carbon, nitrogen, oxygen, yttrium and zirconium observed after being exposed to air plasma etching were entirely consistent with: the removal of pendant Q (trimethylammonium) functions; increased exposure of the underlying yttrium-stabilised zirconia shell; and introduction of hydroxyl and carbonyl functions. Following plasma polymerization treatments (with all three monomers tested), the increased atomic percent levels of carbon and parallel drops in nitrogen, yttrium and zirconium provided clear evidence that thin polymer coats had been created at the exteriors of Q HyperZ adsorbent particles. No changes in adsorbent size and surface morphology, nor any evidence of plasma-induced damage could be discerned from scanning electron micrographs, light micrographs and measurements of particle size distributions following 3 h exposure to air (220 V; 35.8 W L⁻¹) or ‘vinyl acetate/argon’ (170 V; 16.5 W L⁻¹) plasmas. Losses in bulk chloride exchange capacity before and after exposure to plasmas enabled effective modification depths within hydrated Q HyperZ adsorbent particles to be calculated as 0.2–1.2 μm, depending on the conditions applied. The depth of plasma induced alteration was strongly influenced by the power input and size of the treated batch, i.e. dropping the power or increasing the batch size resulted in reduced plasma penetration and therefore shallower modification. The selectivity of ‘surface vs. core’ modification imparted to Q HyperZ by the various plasma treatments was evaluated in static and dynamic binding studies employing appropriate probes, i.e. plasmid DNA, sonicated calf thymus DNA and bovine serum albumin. In static binding studies performed with adsorbents that had been exposed to plasmas at the 5 g scale (25 g L⁻¹ of plasma reactor), the highest ‘surface/core’ modification selectivity was observed for Q HyperZ that had been subjected to 3 h of air plasma etching at 220 V (35.8 W L⁻¹). This treatment removed ∼53% of ‘surface’ DNA binding at the expense of a 9.3% loss in ‘core’ protein binding. Even more impressive results were obtained in dynamic expanded bed adsorption studies conducted with Q HyperZ adsorbents that had been treated with air (220 V, 3 h) and ‘vinyl acetate/argon’ (170 V, 3 h) plasmas at 10.5 g scale (52.5 g L⁻¹ of plasma reactor). Following both plasma treatments: the 10% breakthrough capacities of the modified Q HyperZ adsorbents towards ‘surface’ binding DNA probes dropped very significantly (30–85%); the DNA induced inter-particle cross-linking and contraction of expanded beds observed during application of sonicated DNA on native Q HyperZ was completely eradicated; but the ‘core’ protein binding performance remained unchanged cf. that of the native Q HyperZ starting material.