Hydrolysis of the Peptide Bond in N-Acetylated L-Methionylglycine Catalyzed by Various Palladium(II) Complexes: Dependence of the Hydrolytic Reactions on the Nature of the Chelate Ligand in cis-[Pd( L)(H 2O) 2] 21 Complexes

Summary. Hydrolytic reactions between various palladium(II) complexes of the type cis-[Pd(L)(H₂O)₂]²⁺ in which L is ethylenediamine (en), 1,2-propylenediamine (1,2-pn), isobutylenediamine (ibn), 1,2-diaminocyclohexane (1,2-dach), N-methylethylenediamine (Meen), N,N,N,N-tetramethylethylenediamine (Me₄en), S-methyl L-cysteine (MeS-L-HCys), L-methionine (L-HMet), and 2,5-dithiahexane (dth) and dipeptide N-acetylated L-methionylglycine (MeCOMet-Gly) were studied by ¹H NMR spectroscopy. The reactions were carried out in the pH range 2.0–2.5 and at 50°C. In all these reactions, palladium(II) complex bound to a methionine residue effects the regioselective cleavage of the amide bond involving the carboxylic group of methionine. We found that the rate of hydrolysis and mechanism of this reaction are strongly dependent from the nature of the chelate ligand L in palladium(II) complexes of the type cis-[Pd(L)(H₂O)₂]²⁺.     

Crystallographic evidence of Gly‐d,l‐Met oxidation to its sulfoxide in the presence of gold(III): solid solution of the racemic mixture of two diastereoisomers

Crystallographic analysis of a solid solution of two diastereoisomers, i.e. ({(1S,R)‐1‐carboxy‐3‐[(R,S)‐methylsulfinyl]propyl}aminocarbonyl)methanaminium tetrachloridoaurate(III) and ({(1S,R)‐1‐carboxy‐3‐[(S,R)‐methylsulfinyl]propyl}aminocarbonyl)methanaminium tetrachloridoaurate(III), (C₇H₁₅N₂O₄S)[AuCl₄], has shown that in the presence of gold(III), the methionine part of the Gly‐d ,l ‐Met dipeptide is oxidized to sulfoxide, and no coordination to the Au^III cation through the S atom of the sulfoxide is observed. In view of our observation, literature reports that methionine acts as an N,S‐bidentate donor ligand forming stable gold(III) complexes require verification. Moreover, it has been demonstrated that crystallization of the oxidation product leads to a substantial 77:23 excess of both S‐methionine/R‐sulfoxide and R‐methionine/S‐sulfoxide over S‐methionine/S‐sulfoxide and R‐methionine/R‐sulfoxide. The presence of two different diastereoisomers at the same crystallographic site is a source of static disorder at this site.     

Hydrolysis of the amide bond in N-acetylated l-methionylglycine catalyzed by various platinum(II) complexes under physiologically relevant conditions

The hydrolytic reactions between various Pt(II) complexes of the type [Pt(L)Cl₂] and [Pt(L)(CBDCA-O,O′] (L is ethylenediamine, en; (±)-trans-1,2-diaminocyclohexane, dach; (±)-1,2-propylenediamine, 1,2-pn and CBDCA is the 1,1-cyclobutanedicarboxylic anion) and the N-acetylated l-methionylglycine dipeptide (MeCOMet-Gly) were studied by ¹H NMR spectroscopy. All reactions were realized at 37 °C with equimolar amounts of the Pt(II) complex and the dipeptide at pH 7.40 in 50 mM phosphate buffer in D₂O. Under these experimental conditions, a very slow cleavage of the Met-Gly amide bond was observed and this hydrolytic reaction proceeds through the intermediate [Pt(L)(H₂O)(MeCOMet-Gly-S)]⁺ complex. In general, it can be concluded that faster hydrolytic cleavage of the MeCOMet-Gly dipeptide was observed in the reaction with the chloride complex than with corresponding CBDCA Pt(II) complexes. The steric effects of the Pt(II) complex on the hydrolytic cleavage of the amide bond in the MeCOMet-Gly dipeptide were also investigated by ¹H NMR spectroscopy. It was found that the rate of hydrolysis decreases as the steric bulk of the CBDCA and chlorido Pt(II) complexes increase (en > 1,2-pn > dach). These results contribute to a better understanding of the toxic side effects of Pt(II) antitumor drugs and should be taken into consideration when designing new potential Pt(II) antitumor drugs with preferably low toxic side effects.     

Salting-out thin layer chromatography of transition metal complexes: A comparative study of the effect of increased number of CH2 groups in chelate rings

Summary The regularities previously established in salting-out thin-layer chromatography on silica gel of Co(III) complexes, in which the side chains of a specific chelate ring were successively increased in length, were also found to be valid for two series of Co(III) complexes of the EDTA type, in which different chelate rings were enlarged by one CH₂ group. It was found that in the case of complexes of the EDTA type the salting-out efficiencies were practically the same for all members of a series, while the values of the separation factors were paractically independent of the ammonium sulphate concentration in the solvent system used. The results obtained were consistent with the mechanism of nonspecific hydrophobic interactions. The method used can be applied to the separation of the members of the series of complexes that we investigated.     

Hydrolysis of amide bond in histidine-containing peptides promoted by chelated amino acid palladium(II) complexes: dependence of hydrolytic pathway on the coordination modes of the peptides

Hydrolytic reactions between cis-[Pd( -Ala-N,O)Cl₂]⁻ and cis-[Pd( -Ala-N,O)(H₂O)₂]⁺, in which -Ala is alanine coordinated through N and O atoms, and N-acetylated peptides -histidylglycine (MeCO-His-Gly), glycyl- -histidine (MeCO-Gly-His), glycylglycyl- -histidine (MeCO-Gly-Gly-His) and glycyl- -histidylglycine (MeCO-Gly-His-Gly) were studied by ¹H NMR spectroscopy. All reactions were carried out in the pH range 2.0–2.5 and two different temperatures, 22 and 60°C. In the reactions of these two palladium(II) complexes with MeCO-His-Gly, complete hydrolysis of the amide bond involving carboxylic group of histidine occurs in less than 24 h. The cleavage is regioselective. With peptides containing free a carboxylic group of histidine, MeCO-Gly-His and MeCO-Gly-Gly-His, palladium(II) complex promote the cleavage of the MeCO–Gly and Gly–Gly amide bonds. No cleavage of the Gly–His amide bond was observed. The mechanism of these hydrolytic reactions involves release of -Ala ligand and aquation of the palladium(II) complex chelated to the substrate through the imidazole N-3 atom and deprotonated nitrogen atom of the amide bond involving amino group of histidine. This aqua complex represents a catalytically active form different from the initially added catalytically inactive complex. In the reactions of palladium(II) complexes with tripeptide MeCO-Gly-His-Gly, two amide bonds, MeCO–Gly and His–Gly, were cleaved. The mechanism of the cleavage of these amide bonds is correlated with two different palladium(II)–substrate catalytically active forms. These findings contribute to the better understanding of selective cleavage of peptides and proteins and must be taken into consideration in designing new reagents for this purpose.     

Hydrolysis of the Peptide Bond in N-Acetylated L-Methionylglycine Catalyzed by Various Palladium(II) Complexes: Dependence of the Hydrolytic Reactions on the Nature of the Chelate Ligand in cis-[Pd( L)(H 2O) 2] 21 Complexes

Hydrolytic reactions between various palladium(II) complexes of the type cis-[Pd(L)(H₂O)₂]²⁺ in which L is ethylenediamine (en), 1,2-propylenediamine (1,2-pn), isobutylenediamine (ibn), 1,2-diaminocyclohexane (1,2-dach), N-methylethylenediamine (Meen), N,N,N,N-tetramethylethylenediamine (Me₄en), S-methyl L-cysteine (MeS-L-HCys), L-methionine (L-HMet), and 2,5-dithiahexane (dth) and dipeptide N-acetylated L-methionylglycine (MeCOMet-Gly) were studied by ¹H NMR spectroscopy. The reactions were carried out in the pH range 2.0–2.5 and at 50°C. In all these reactions, palladium(II) complex bound to a methionine residue effects the regioselective cleavage of the amide bond involving the carboxylic group of methionine. We found that the rate of hydrolysis and mechanism of this reaction are strongly dependent from the nature of the chelate ligand L in palladium(II) complexes of the type cis-[Pd(L)(H₂O)₂]²⁺.     

Conformational study of Co(II), Ni(II), and Cr(III) complexes of the edta-type: Crystal structure of 1D polymeric trans(O)-Ba[Co(1,3-pddadp)] · 8H2O complex stabilized by infinite water tapes

The trans(O⁶) isomer of the Ba[Co(1,3-pddadp)] · 8H₂O complex (where 1,3-pddadp represents hexadentate 1,3-propanediamine-N,N′-diacetate-N,N′-di-3-propionate ion) has been prepared and characterized by X-ray crystallography. In the crystal structure the complex cations and anions are bridged by carboxylate oxygen atoms from the in-plane coordinated glycinate rings (G-rings) of [Co(1,3-pddadp)]²⁻ and by the barium-coordinated water molecules, thus forming 1D polymeric chains, separated by infinite water tapes hydrogen bonded to the [Co(1,3-pddadp)]²⁻ carboxylate oxygens from the out-of-plane β-alaninate rings (R-rings). Conformational analysis of the three possible geometrical isomers: trans(O⁵), trans(O⁵O⁶), and trans(O⁶) of the [Co(1,3-pddadp)]²⁻ complex, with ligand acting as hexadentate, as well as of the corresponding complexes of Ni(II) and Cr(III) has been performed using the consistent force field (CFF) method, with the parameters developed previously for edta-type complexes of chromium(III) and supplemented with new parameters for cobalt(II) and nickel(II). The energy-minimized structure of the trans(O⁵O⁶) isomer represents the global minimum for the [M(1,3-pddadp)]ⁿ⁻ (M = Co(II), Ni(II), and Cr(III)) species. The occurrence of the least energetically favored trans(O⁶) isomer in a crystal and the exceptional conformation of the axially oriented β-alaninate rings can be accounted for by the stabilizing role of the infinite tapes of planar cyclic water pentamers and hexamers which act as a “glue” to reinforce the coordination polymeric chains.     

Coordination behaviour and two‐dimensional‐network formation in poly[[μ‐aqua‐diaqua(μ5‐propane‐1,3‐diyldinitrilotetraacetato)dilithium(I)cobalt(II)] dihydrate]: the first example of an MII–1,3‐pdta complex with a monovalent metal counter‐ion

The title compound, {[CoLi₂(C₁₁H₁₄N₂O₈)(H₂O)₃]·2H₂O}_n, constitutes the first example of a salt of the [M^II(1,3‐pdta)]²⁻ complex (1,3‐pdta is propane‐1,3‐diyldinitrilotetraacetate) with a monopositive cation as counter‐ion. Insertion of the Li⁺ cation could only be achieved through application of the ion‐exchange column technique which, however, appeared unsuccessful with other alkali metals and the ammonium cation. The structure contains two tetrahedrally coordinated Li⁺ cations, an octahedral [Co(1,3‐pdta)]²⁻ anion and five water molecules, two of which are uncoordinated, and is built of two‐dimensional layers extending parallel to the (010) lattice plane, the constituents of which are connected by the coordinate bonds. O—H_water...O hydrogen bonds operate both within and between these layers. The crystal investigated belongs to the enantiomeric space group P2₁ with only one (Λ) of two possible optical isomers of the [Co(1,3‐pdta)]²⁻ complex. A possible cause of enantiomer separation during crystallization might be the rigidification and polarization of the [M(1,3‐pdta)]²⁻ core, resulting from direct coordination of Li⁺ cations to three out of four carboxylate groups constituting the 1,3‐pdta ligand. The structure of (I) differs considerably from those of the other [M^II(1,3‐pdta)]²⁻ complexes, in which the charge compensation is realized by means of divalent hexaaqua complex cations. This finding demonstrates a significant structure‐determining role of the counter‐ions.     

A study of the reactions of methionine- and histidine-containing peptides with palladium(II) complexes: The key role of steric crowding on palladium(II) in the selective cleavage of the peptide bond

¹H NMR spectroscopy was applied to study the reactions of palladium(II) complexes, cis-[Pd(dpa)Cl₂] and cis-[Pd(dpa)(H₂O)₂]²⁺ (dpa is 2,2′-dipyridylamine acting as a bidentate ligand) with the dipeptides methionylglycine (Met-Gly) and histidylglycine (His-Gly), and the N-acetylated derivatives of these dipeptides, MeCOMet-Gly and MeCOHis-Gly. All reactions were carried out in the pH range 2.0–2.5 with equimolar amounts of the palladium(II) complex and the peptide at two different temperatures, 25 and 60 °C. In the reactions of cis-[Pd(dpa)Cl₂] and cis-[Pd(dpa)(H₂O)₂]²⁺ with Met-Gly and His-Gly, no hydrolysis of the peptide bond was observed. The final product in these reactions was the [Pd(dpa)₂]²⁺ complex. The square-planar structure of this complex was confirmed by X-ray analysis. The reaction of the cis-[Pd(dpa)(H₂O)₂]²⁺ complex with the MeCOHis-Gly and MeCOMet-Gly peptides under the previously mentioned experimental conditions was remarkably selective in the cleavage of the amide bond involving the carboxylic group of methionine in the side chain. The modes of coordination of cis-[Pd(dpa)Cl₂] and cis-[Pd(dpa)(H₂O)₂]²⁺ in the reactions with the non-acetylated peptides and the total steric inhibition of the hydrolytic reaction between cis-[Pd(dpa)(H₂O)₂]²⁺ and MeCOHis-Gly can be attributed to the steric bulk of the palladium(II) complex. This finding should be taken into consideration in designing new palladium(II) complexes for the regioselective cleavage of peptides and proteins.     

Reactions of platinum(II) complexes with sulfur- and histidine-containing peptides: a model for selective platination of peptides and proteins

The reactions between two monofunctional platinum complexes [Pt(Me₄dien)Cl]⁺ (Me₄dien = 1,1,7,7-tetramethyl-diethylenetriamine) and [Pt(Et₄dien)Cl]⁺ (Et₄dien = 1,1,7,7-tetraethyldiethylenetriamine) and the peptides, N-acetylated L-methionyl-L-histidine (MeCO–Met–His) and glutathione (GSH), have been investigated by ¹H-n.m.r. spectroscopy and u.v.–vis. spectrophotometry. The reactions of the platinum(II) complexes with MeCO–Met–His were carried out at room temperature and at pH 3.0 and 7.0, whereas with GSH the reactions were studied only at pH 3.0. No binding of these two platinum complexes to the sulfur atom of methionine or to nitrogen atoms of histidine residue of MeCO–Met–His was observed during the first 24 h. When the reaction was followed further, after 24 h very slow binding of [Pt(Me₄dien)Cl]⁺ to the N3 nitrogen atom of imidazole was observed. Both platinum complexes react with the sulfur atom of the cysteine residue in GSH. Kinetic data show that GSH reacts twice as fast with [Pt(Me₄dien)Cl]⁺ than with [Pt(Et₄dien)Cl]⁺. Our findings indicate that sterically crowded platinum(II) complexes are only capable of reacting with the sulfhydryl group of the cysteine residue. This influences the design of new platinum(II) complexes for selective covalent modification of peptides and proteins.