Complex formation of isocytosine tautomers with PdII and PtII

Isocytosine (ICH) exists in solution as two major tautomers, the keto form with N1 carrying a proton (1a) and the keto form with N3 being protonated (1b). In water, 1a and 1b exist in equilibrium with almost equal amounts of both forms present. Reactions with a series of Pd(II) and Pt(II) am(m)ine species such as (dien)Pd(II), (dien)Pt(II), and trans-(NH(3))(2)Pt(II) reveal, however, a distinct preference of these metals for the N3 site, as determined by (1)H NMR spectroscopy. Individual species have been identified by the pD dependence of the ICH resonances. pK(a) values (calculated for H(2)O) for deprotonation of the individual tautomers complexes are 6.5 and 6.4 for the N3 linkage isomers of dienPd(II) and dienPt(II), respectively, as well as 6.2 and 6.0 for the N1 linkage isomers. The dimetalated species [(dienM)(2)(IC-N1,N3)](3+) (M = Pd(II) or Pt(II)) are insensitive over a wide range of pD. The crystal structure analysis of [(dien)Pd(ICH-N3)](NO(3))(2) is reported. Ab initio calculations have been performed for tautomer compounds of composition [(NH(3))(3)Pt(ICH)](2+), cis- and trans-[(NH(3))(2)PtCl(ICH)](+), as well as trans-[(NH(3))(2)Pt(ICH)(2)](2+). Without exception, N3 linkage isomers are more stable, in agreement with experimental findings. As to the reasons for this binding preference, an NBO (natural bond orbital) analysis for [(NH(3))(3)Pt(ICH-N3)](2+)strongly suggests that intramolecular hydrogen bonding between trans-positioned NH(3) ligands and the two exocyclic groups of the ICH is of prime importance. The calculations furthermore show a marked pyramidalization of the NH(2) group of ICH in the complex once the heterocyclic ligand forms a dihedral angle <90 degrees with the Pt coordination plane.     

Isocytosine as a hydrogen-bonding partner and as a ligand in metal complexes

Isocytosine (ICH; 1) exists in solution in an equilibrium of tautomers 1a and 1b with the N1 and N3 positions carrying the acidic proton, respectively. In the solid state, both tautomers coexist in a 1:1 ratio. As we show, the N3H tautomer 1b can selectively be crystallized in the presence of the model nucleobase 1-methylcytosine (1-MeC). The complex 1b x (1-MeC)2 x H2O (2) forms pairs through three hydrogen bonds between the components; hydrogen bonds between identical molecules are also formed, leading to an infinite tape structure. On the other hand, the N1H tautomer 1a co-crystallizes with protonated ICH to give [1a x ICH2]NO3 (3), again with three hydrogen bonds between the partners, yet the acidic proton is disordered over the two entities. With M(II)(dien) (M=Pt, Pd; dien=diethylenetriamine) preferential coordination of tautomer 1a through the N3 position is observed. DFT calculations, which were also extended to Pt(II)(tmeda) linkage isomers (tmeda=N,N,N',N'-tetramethylethylenediamine), suggest that intramolecular hydrogen bonding between the ICH tautomers and the co-ligands at M, while adding to the preference for N3 coordination, is not the major determining factor. Rather it is the inherently stronger Pt-N3 bond which favors complexation of 1a. With an excess of M(II)(dien), dinuclear species [M2(dien)2(IC-N1,N3)]3+ (M=Pd(II), 4 and Pt(II), 5) also form and were isolated as their ClO4(-) salts and structurally characterized. In strongly acidic medium 5 is converted to [Pt(dien)(ICH-N1)]2+ (6), that is, to the Pt(II) complex of tautomer 1b.     

Effect of adsorption of vapours on the electrical conductivity of lycopene crystals: Evidence of a three-stage adsorption process

Upon adsorption of various vapours, the electrical conductivity of lycopene semiconductor changes appreciably This phenomenon had been used as a probe to study the adsorption and desorption processes in these polyene crystals The adsorption and desorption kinetics have been found to follow a modified Roginsky-Zeldovich relation A three-stage adsorption process has been identified The first stage gives a Lennard-Jones potential energy curve, followed by a transition over a potential barrier to the second stage of adsorption in a potential well In the third stage a deep potential energy surface is reached by activation over a second potential barrier and strongly bound complexes between the vapour molecules and the surface molecules of the crystals are finally formed.     

Diastereoselective Strategies towards Thia[n]helicenes

In the present study, we have investigated different strategies for diastereoselective synthesis of thia[n]helicenes. We describe the introduction of different chiral auxiliaries at various positions and investigated their effect in the photocyclization reaction. Different chiral groups were placed at the sterically hindered position of the helical core and their interactions with various solvents and metals like copper were investigated. The use of Cu^I salts has led to high diastereoselectivity in the photocyclization process and we were successful in obtaining the thia[5]helicene in enantiomerically pure form in good yield. The single diastereomer obtained was characterized by X‐ray crystallography. From the study of the barrier of racemization of these thia[5]helicenes, the stability was found to be comparable to unsubstituted tetrathia[7]helicenes and substituted diazadithia[7]helicenes. This approach provides an easy access to enantiopure helicenes.     

Modification of proteins with cyclodextrins prevents aggregation and surface adsorption and increases thermal stability

This work describes a general approach for preventing protein aggregation and surface adsorption by modifying proteins with β-cyclodextrins (βCD) via an efficient water-driven ligation. As compared to native unmodified proteins, the cyclodextrin-modified proteins (lysozyme and RNase A) exhibit significant reduction in aggregation, surface adsorption and increase in thermal stability. These results reveal a new chemistry for preventing protein aggregation and surface adsorption that is likely of different mechanisms than that by modifying proteins with poly(ethylene glycol).     

DC Electrical Study of Modified PMMA,PVC and their Blend

Summary: Thin films of high molecular weight PMMA, PVC and their blend were prepared with solution cast method. Further they were modified by adding Camphor Sulphonic Acid (CSA) to them. DSC studies indicate single glass transition temperature (Tg) for unmodified as well as modified blends indicating the miscibility of polymers. FTIR studies show the interaction between CSA-PVC, CSA-PMMA, CSA-(PVC+PMMA) blend. The D.C. electrical study was carried out at various temperatures from room temperature (307 K) to 373 K. After modification the variation of DC conductivity (σ) is found to decrease in PVC and the PVC-PMMA blend whereas it is found to increase in PMMA with rise in temperature.     

Solid-state decomposition studies on fluoroperoxo species of transition metals part II

The kinetics of isothermal decomposition of solid K₂Zr₂(O₂)₂F₆·2H₂O have been studied in the temperature range 100–226° under vacuum. The fractional decomposition has been determined by measuring the pressure of evolved oxygen during pyrolysis with the help of a McLeod gauge. The values ranged from 0.05 to 0.62. The vs. t data showed that the kinetics are deceleratory throughout the course of the reaction. The initial part of the decomposition reaction could be best described by a unimolecular decay law, while the later stages obey contracting volume kinetics. The activation energies have been determined and the respective values for the above stages are 13.6 and 6.9 kcal·mole^–1.

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Zusammenfassung Die Kinetik der isothermen Zersetzung von festen K₂Zr₂(O₂)₂F₆·2H₂O wurde im Temperaturbereich von 100–226° im Vakuum untersucht. Die fraktionierte Zersetzung wurde durch Messung des Druckes des während der Pyrolyse entwickelten Sauerstoffs mit einem McLeod-Manometer bestimmt. Die -Werte variierten von 0.05 bis 0.62. Die -t Daten zeigen, daß die Kinetik im Verlauf der Reaktion herabgesetzt wird. Der erste Teil der Zersetzungsreaktion konnte am besten durch ein unimolekulares Zerfallgesetzt beschrieben werden, während die späteren Phasen der Kinetik der Volumenkontraktion gehorchten. Die Aktivierungsenergien wurden berechnet und die entsprechenden Werte für obige Reaktionen ergaben sich 13.6 bzw. 6.9 Kcal mol^–1.

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K₂Zr₂(O₂)₂F₆·2₂ 100–226°. «» , , . «» 0.05 0.62. –t , . , — . , , , 13.6 6.9 .^–1.

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One of the authors (SMK) is grateful to I.I.T. Delhi for a research scholarship.     

Pseudolycorine N-oxide,a new N-oxide from Narcissus tazetta

Abstract

A new N-oxide, Pseudolycorine N-oxide (1) was characterised along with eleven known alkaloids homolycorine (2), O-methylmaritidine (3), 8-O-demethylhomolycorine (4), homolycorine N-oxide (5), lycorine (6), narciclasine (7), pseudolycorine (8), ungeremine (9), 8-O-demethylmaritidine (10), zefbetaine (11) and lycorine N-oxide (12), from Narcissus tazetta. Their structures were established on the basis of spectroscopic data analysis. The extract, fractions and isolated compounds were screened for in vitro cytotoxicity against two human cancer cell lines, human cervical cancer (SiHa) and human epidermoid carcinoma (KB) cells. The study demonstrated the cytotoxic potential of extract and its chloroform and n-butanol fractions. Further, the results revealed the bioactive potential of narciclasine, pseudolycorine and homolycorine alkaloids. However, new N-oxide (1) was not active against these cell lines.