Dielectric relaxation analysis of starch oligomers and polymers with respect to their chain length

Starch belongs to the polyglucan group. This type of polysaccharide shows a broad β-relaxation process in dielectric spectra at low temperatures, which has its molecular origin in orientational motions of sugar rings via glucosidic linkages. This chain dynamic was investigated for α(1,4)-linked starch oligomers with well-defined chain lengths of 2, 3, 4, 6, and 7 anhydroglucose units (AGUs) and for α(1,4)-polyglucans with average degrees of polymerization of 5, 10, 56, 70, and so forth (up to 3000; calculated from the mean molecular weight). The activation energy (E_a) of the segmental chain motion was lowest for dimeric maltose (E_a = 49.4 ± 1.3 kJ/mol), and this was followed by passage through a maximum at a degree of polymerization of 6 (E_a = 60.8 ± 1.8 kJ/mol). Subsequently, E_a leveled off at a value of about 52 ± 1.5 kJ/mol for chains containing more than 100 repeating units. The results were compared with the values of cellulose-like oligomers and polymers bearing a β(1,4)-linkage. Interestingly, the shape of the E_a dependency on the chain length of the molecules was qualitatively the same for both systems, whereas quantitatively the starch-like substances generally showed higher E_a values. Additionally, and for comparison, three cyclodextrins were measured by dielectric relaxation spectroscopy. The ringlike molecules, with 6, 7, and 8 α(1,4)-linked AGUs, showed moderately different types of dielectric spectra. © 2003 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 42: 188–197, 2004     

On the computation of scaling coefficients of Daubechies' wavelets

In the present paper, Daubechies' wavelets and the computation of their scaling coefficients are briefly reviewed. Then a new method of computation is proposed. This method is based on the work [7] concerning a new orthonormality condition and relations among scaling moments, respectively. For filter lengths up to 16, the arising system can be explicitly solved with algebraic methods like Gröbner bases. Its simple structure allows one to find quickly all possible solutions.     

Synthese de composes dihydro-2,3 furanniques par hydroboration d'alcools β-acetyleniques

Hydroboration of β-acetylenic alcohols followed by NaOH/H₂O₂ oxidation leads to hemiacetals of γ-aldols which are easily dehydrated to 2,3-dihydrofuran compounds. The reaction gives good yields with hindered alcohols and its stereochemistry may be controlled during the organometallic synthesis of the starting alcohol.     

A liquid chromatography/electrospray ionization-tandem mass spectrometry method for quantification of specific organophosphorus pesticide biomarkers in human urine

Organophosphorus pesticides are commonly used in both agricultural and residential settings. The widespread use of these chemicals makes it almost impossible for humans to avoid exposure. In order to determine background human exposure, there is a need for fast, reliable, and sensitive analytical methods. We have developed a sensitive method to quantify specific biomarkers of the organophosphorus pesticides acephate, azinphos, chlorpyrifos, coumaphos, diazinon, isazofos, malathion, methamidophos, parathion and pirimiphos or their O,O-dimethyl analogues in human urine, as their selective metabolites or as the intact pesticide. Isotopically labeled internal standards were used for eight of the analytes. The use of labeled internal standards in combination with high-performance liquid chromatography electrospray ionization–tandem mass spectrometry provided a high degree of specificity. Repeated analysis of urine samples fortified with high and low concentrations of the analytes gave relative standard deviations (RSD) of less than 10% for the analytes with an isotopically labeled standard. Analytes without isotopically labeled standards had higher RSD. For all compounds except methamidophos and acephate, the recoveries were greater than 70%. The limits of quantification for most of the analytes were in the range of 0.1 to 1 ng/mL. We detected concentrations of most of these pesticides and/or their metabolites in urine samples from non-occupationally exposed persons using our method. Our frequencies of detection for the analytes measured ranged from 1% to 98%.     

Chalcogenide derivatives of imidotin cage complexes

Reaction of the secocubane [Sn3(mu2-NHtBu)2(mu2-NtBu)(mu3-NtBu)] (1) with dibutylmagnesium produces the heterobimetallic cubane [Sn3Mg(mu3-NtBu)4] (4) which forms the monochalcogenide complexes of general formula [ESn3Mg(mu3-NtBu)4] (5a, E = Se; 5b, E = Te) upon reaction with elemental chalcogens in THF. By contrast, the reaction of the anionic lithiated cubane [Sn3Li(mu3-NtBu)4]- with the appropriate quantity of selenium or tellurium leads to the sequential chalcogenation of each of the three Sn(II) centres. Pure samples of the mono- or dichalcogenides are, however, best obtained by stoichiometric redistribution reactions of [Sn3Li(mu3-NtBu)4]- and the trichalcogenides [E3Sn3Li(mu3-NtBu)4]- (E = Se, Te). These reactions are conveniently monitored by using 119Sn NMR spectroscopy. The anion [Sn3Li(mu3-NtBu)4]- also acts as an effective chalcogen-transfer reagent in reactions of selenium with the neutral cubane [{Snmu3-N(dipp)}4] (8) (dipp = 2,6-diisopropylphenyl) to give the dimer [(thf)Sn{mu-N(dipp)}2Sn(mu-Se)2Sn{mu-N(dipp)}2Sn(thf)] (9), a transformation that results in cleavage of the Sn4N4 cubane into four-membered Sn2N2 rings. The X-ray structures of 4, 5a, 5b, [Sn3Li(thf)(mu3-NtBu)4(mu3-Se)(mu2-Li)(thf)]2 (6a), [TeSn3Li(mu3-NtBu)4][Li(thf)4] (6b), [Te2Sn3Li(mu3-NtBu)4][Li([12]crown-4)2] (7b') and 9 are presented. The fluxional behaviour of cubic imidotin chalcogenides and the correlation between NMR coupling constants and tin-chalcogen bond lengths are also discussed.     

Application of time-resolved infrared spectroscopy to electronic structure in metal-to-ligand charge-transfer excited states

Infrared data in the nu(CO) region (1800-2150 cm(-1), in acetonitrile at 298 K) are reported for the ground (nu(gs)) and polypyridyl-based, metal-to-ligand charge-transfer (MLCT) excited (nu(es)) states of cis-[Os(pp)2(CO)(L)](n)(+) (pp = 1,10-phenanthroline (phen) or 2,2'-bipyridine (bpy); L = PPh3, CH(3)CN, pyridine, Cl, or H) and fac-[Re(pp)(CO)3(4-Etpy)](+) (pp = phen, bpy, 4,4'-(CH3)2bpy, 4,4'-(CH3O)2bpy, or 4,4'-(CO2Et)2bpy; 4-Etpy = 4-ethylpyridine). Systematic variations in nu(gs), nu(es), and Delta(nu) (Delta(nu) = nu(es) - nu(gs)) are observed with the excited-to-ground-state energy gap (E(0)) derived by a Franck-Condon analysis of emission spectra. These variations can be explained qualitatively by invoking a series of electronic interactions. Variations in dpi(M)-pi(CO) back-bonding are important in the ground state. In the excited state, the important interactions are (1) loss of back-bonding and sigma(M-CO) bond polarization, (2) pi(pp*-)-pi(CO) mixing, which provides the orbital basis for mixing pi(CO)- and pi(4,4'-X(2)bpy)-based MLCT excited states, and (3) dpi(M)-pi(pp) mixing, which provides the orbital basis for mixing pipi- and pi(4,4'-X(2)bpy*-)-based MLCT states. The results of density functional theory (DFT) calculations on the ground and excited states of fac-[Re(I)(bpy)(CO)3(4-Etpy)](+) provide assignments for the nu(CO) modes in the MLCT excited state. They also support the importance of pi(4,4'-X2bpy*-)-pi(CO) mixing, provide an explanation for the relative intensities of the A'(2) and A' ' excited-state bands, and provide an explanation for the large excited-to-ground-state nu(CO) shift for the A'(2) mode and its relative insensitivity to variations in X.     

Structure and mechanical properties of poly(l-lactide)/layered silicate nanocomposites

Poly(ε-caprolactone) (PCL) masterbatches with the intercalated and the exfoliated morphology were prepared by ring opening polymerization of ε-caprolactone in the presence of organomodified montmorillonite (MMT) Cloisite 30B. Poly(l-lactide) (PLLA) nanocomposites with Cloisite 30B or PCL masterbatches were prepared by melt blending. The effects of the silicate type, MMT content and the nanocomposite morphology on thermal and mechanical properties of PLLA nanocomposites were examined. The montmorillonite particles in PLLA/Cloisite 30B and PLLA/intercalated masterbatch nanocomposites were intercalated. In contrary to expectations, the exfoliated silicate layers of exfoliated masterbatch were not transferred into the PLLA matrix. Due to a low miscibility of PCL and PLLA, MMT remained in the phase-separated masterbatch domains. The stress-strain characteristics of PLLA nanocomposites, Young modulus E, yield stress σ_y and yield strain ε_y, decreased with increasing MMT concentration, which is associated with the increase in PCL content. The expected stiffening effect of MMT was low due to a low aspect ratio of its particles and was obscured by both plastifying effects of PCL and low PLLA crystallinity. Interestingly, in contrast to the neat PLLA, ductility was enhanced in all PLLA/Cloisite 30B materials and in PLLA/masterbatch nanocomposites with low MMT concentrations.     

Gene expression analysis for high throughput screening applications

To meet growing needs for high throughput gene expression profiling, we established a new automated high throughput TaqMan RT-PCR method for quantitative mRNA expression analysis. In this method, the Allegro( trade mark ) (Zymark) system conducts all sample tracking and liquid handling steps, and ABI PRISM 7900 HT (Applied Biosystems) is used to conduct real-time determination of the C(t) value when amplification of PCR products is first detected and accumulation of inhibitory PCR products is unlikely to occur. The ABI PRISM 7900 HT Sequence Detection System features a real-time PCR instrument with 384-well-plate compatibility and robotic loading, and continuous wavelength detection, which enables the use of multiple fluorophores in a single reaction. The Allegro System offers an assembly line approach with a modular design that allows reconfiguration of the components to accommodate variations in the assay flow. In the present study, we have established and validated a new automated High Throughput (HT) TaqMan RT-PCR- based method for quantitative mRNA expression analysis. The data demonstrate that HT-Taqman PCR is a powerful tool that can be used for measuring low concentrations of mRNA, and is highly accurate, reproducible, and amenable to high throughput analysis. Results suggest that HT-TaqMan is a reliable method for the quantification of low-expression genes and a powerful tool with HT capability for target identification/validation, structure-activity relationship (SAR) study, compound selection for efficacy studies, and biomarker identification in drug discovery and development.     

Polyphenols from Dichrostachys cinerea Fruits Anti-Inflammatory,Analgesic, and Antioxidant Capacity in Freund’s Adjuvant-Induced Arthritic Rat Model

Dichrostachys cinerea (L.) Wigth & Arn. (DC) is widely used in traditional medicine against several inflammatory diseases, especially rheumatoid arthritis, because of its antioxidant and anti-inflammatory effects. This study aimed to characterize the polyphenol-rich DC fruit extracts and investigate the analgesic, anti-inflammatory, and antioxidant effects in a rat inflammation model induced by complete Freund’s adjuvant (CFA). Water and ethanolic extracts were characterized using liquid chromatography coupled with mass spectrometry (LC-MS), Fourier-transform infrared (FTIR) spectroscopy, and gas chromatography coupled with mass spectrometry (GC-MS). The polyphenol-rich extracts were administered in three different concentrations for 30 days. Pain threshold, thermal hyperalgesia, edema, and serum biomarkers specific to inflammatory processes or oxidative stress were evaluated. Both extracts were rich in polyphenolic compounds, mainly flavan-3-ols, proanthocyanidins, and flavone glycosides, which had important in vitro antioxidant capacity. DC fruit extracts administration had the maximum antinociceptive and anti-inflammatory effects after one day since the CFA injection and showed promising results for long-term use as well. The measurement of pro-inflammatory cytokines, cortisol, and oxidative stress parameters showed that DC extracts significantly reduced these parameters, being dose and extract-type dependent. These results showed potential anti-inflammatory, analgesic, and antioxidative properties and revealed the necessity of using a standardized polyphenolic DC extract to avoid result variability.