Investigating the relationship between cell cycle stage and diosgenin-induced megakaryocytic differentiation of HEL cells using sedimentation field-flow fractionation

Differentiation therapy could be one strategy for stopping cancer cell proliferation. A plant steroid, diosgenin, is known to induce megakaryocytic differentiation in human erythroleukemia (HEL) cells. In recent studies, the use of sedimentation field-flow fractionation (SdFFF) allowed the preparation of subpopulations that may differ in regard to sensitivity to differentiation induction. The specific goal of this study was to determine the relationship between cell cycle stage and sensitivity to megakaryocytic differentiation induction of HEL cells. After first confirming the capacity of diosgenin to specifically select targets, hyperlayer SdFFF cell sorting was used to prepare fractions according to cell cycle position from crude HEL cells. The sensitivities of these fractions to diosgenin-induced differentiation were then tested. The coupling of SdFFF cell separation to imaging flow cytometry showed that G1-phase cells were more sensitive to differentiation induction than S/G2M-phase cells, confirming the relationship between cell status at the start of induction, the extent of the biological event, and the potential of SdFFF in cancer research.     

Modification of guanine residues in PNA-synthesis by PyBOP

The phosphonium-type coupling reagent PyBOP, when applied to the synthesis of peptide nucleic acid (PNA) oligomers, was found to form O⁴-phosphonium compounds of the nucleobase guanine which can be converted into C⁴-modified guanine-derived PNAs by nucleophiles.     

Investigation of gel porosity clogging during glass leaching

A 5-oxide glass (62.5SiO₂, 16.6B₂O₃, 13.1Na₂O, 6.0CaO, 1.8ZrO₂) was leached at 90 °C at a high glass-surface-area-to-solution-volume ratio (SA/V = 80 cm^?1). Its dissolution rate diminished over time until it became unmeasurable. The alteration layer was characterized by ²⁹Si isotopic tracing in the leaching solution. ToF-SIMS elemental profiles showed that glass dissolution ceased due to clogging of the gel porosity at the gel/solution interface. One of the hypotheses proposed to account for the rate drop observed during borosilicate glass alteration is based on morphological changes in the alteration gel over time. Monte Carlo modeling of glass alteration, especially with simple glasses, indicates a clogging of the porosity on the external portion of the gel (near the solution/gel interface) after densification of the layer by silicon precipitation, but this phenomenon had never previously been directly observed experimentally. The initial results obtained by isotopic tracing provide new data that appears to confirm this hypothesis.     

Aqueous alteration of five-oxide silicate glasses: Experimental approach and Monte Carlo modeling

The alteration behavior of glass comprising five oxides (61 ? x)SiO₂–17B₂O₃–18Na₂O–4CaO–xZrO₂ was studied during static leach tests in a buffer solution at 90 °C and with a glass-surface-area-to-solution-volume (SA/V) ratio of 15 cm^?1. The morphological evolution of altered glasses investigated by small-angle X-ray scattering (SAXS) exhibits a strong dependence with the zirconium content in the glass. The experiments were compared with modeling results using Monte Carlo simulation. The model has been improved to simulate the alteration kinetics and alteration layer morphology, considering zirconium atoms at coordination number 6. The simulations exhibit very good agreement with experimental results, showing relations between the alteration rate and the restructuring altered layer. The model is used to interpret experimental observations by proposing a porosity closure mechanism in the altered layer to account for the diminishing alteration rate. For high zirconium concentrations, the simulation highlights the existence of percolation pathways responsible for a complete alteration of the glass. Zirconium has a hardening effect that limits the dissolution of neighboring atoms; this effect is favorable in terms of the glass alteration kinetics, but by inhibiting silicon recondensation it prevents complete closure of the porosity and the glass is completely altered.     

Giant Rabi splitting in metal/semiconductor nanohybrids

We present strong coupling regime between localized plasmon in lithographed nanoparticles and excitons in an organic semiconductor. The lithographed nanoparticles allow a very good control of the particle size and environment, thereby avoiding a large inhomogeneous broadening of the plasmonic resonances which could partially mask the plasmon/exciton hybridization. The nanoparticles diameter ranges from 100 to 200 nm. A giant Rabi splitting energy of 450 meV is obtained, and typical behaviors of mixed states, i.e. anticrossing of their energies and crossing of their linewidths, are observed. Three-dimensional finite-difference time-domain simulations and coupled oscillator calculations are used to analyze and corroborate the experimental results.     

Probing loop quantum gravity with evaporating black holes

This Letter aims at showing that the observation of evaporating black holes should allow the usual Hawking behavior to be distinguished from loop quantum gravity (LQG) expectations. We present a full Monte Carlo simulation of the evaporation in LQG and statistical tests that discriminate between competing models. We conclude that contrarily to what was commonly thought, the discreteness of the area in LQG leads to characteristic features that qualify evaporating black holes as objects that could reveal quantum gravity footprints.     

On the effect of glass composition in the dissolution of glasses by water

The dissolution rate in aqueous solution has been measured for three families of glasses of technological interest (borosilicates, aluminosilicates and lead-silicates). Borosilicates have been altered at a slightly basic pH (8–9), whereas the aluminosilicates and the lead-silicate glasses have been corroded in acidic solutions. In these conditions, silica is always less soluble than all other glass components. In each glass family, the effect of the silica content on the glass dissolution rate has been studied. The three series display a similar behavior as a function of the glass composition, namely a sharp increase of the dissolution rate with the content in soluble oxides. These experimental results have been explained in the framework of a Monte-Carlo simulation of glass dissolution. The simulations show that the fast extraction of the soluble species as compared to that of silica generates a porous surface layer, which becomes thicker and thicker when the percentage of soluble oxide increases in the glass. This increases the interface area between the glass and the solution, and consequently the dissolution rate in the same proportion. The numerical simulations reproduce quite well the experimental variations of the dissolution rates with glass composition.     

Evaluation of the titanium dioxide approach for MS analysis of phosphopeptides

The affinity of titanium dioxide for phosphate groups has been successfully used for enrichment of phosphopeptides from complex mixtures. This paper reports the relationship between the occurrence of some amino acids and the phospho-specific and nonspecific binding of peptides that occurs during titanium dioxide enrichment. In order to perform a systematic study, two well-characterized peptide mixtures consisting of either 33 or 8 synthetic phosphopeptides and their nonphosphorylated analogs, which differed in charge and hydrophobicity, were synthesized and analyzed by ESI-MS and MALDI-MS. The titanium dioxide procedure was also evaluated for comprehensive detection of phosphopeptides in phosphoproteomics. In summary, our results clearly confirm the high selectivity of titanium dioxide for phosphorylated sequences. Drastically reduced recovery was observed for phosphopeptides with multiple basic amino acids. Nonspecific binding of nonphosphorylated peptides and sample loss of phosphopeptides must also be taken into account.     

Derivatization of phosphorylated peptides with S- and N-nucleophiles for enhanced ionization efficiency in matrix-assisted laser desorption/ionization mass spectrometry

The identification of phosphorylation sites is essential for a full understanding of the cellular functions of proteins. However, mass spectrometric analysis is often hampered by the low abundance of phosphoproteins, the difficulty of obtaining full sequence coverage by specific proteolysis reactions, and the low ionization efficiency of phosphopeptides compared with their non-phosphorylated analogs. In the present work a beta-elimination/Michael addition was used to replace the phosphate groups of pSer or pThr by a group which gives rise to an enhanced ionization efficiency. In order to find optimum reaction conditions, beta-elimination/Michael addition was examined using phosphorylated model peptides. Whereas complete elimination of phosphate could be achieved by treatment with barium hydroxide in organic solvents such as ethanol or acetonitrile, the yield of the Michael adduct strongly depended on the nucleophile and the peptide sequence. Reaction with 2-phenylethanethiol, p-bromophenethylamine and ethylenediamine clearly resulted in products showing higher matrix-assisted laser desorption/ionization (MALDI) signal intensities compared with those of the corresponding phosphorylated precursors. The method was successfully used to identify phosphorylated sequences of ovalbumin and human Stat1 by in-gel derivatization with 2-phenylethanethiol and subsequent peptide mass fingerprint analysis of the trypsin digests.